Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02313 ATGGCTTCCACTATAGGTTGTGTGACACTAACTTCAAGCTTGGTTCTAGCTGTTTTATTTGCTCTCACAGTTCAAGTCTTCTACTTCTCACCTATAGATCCACTTttgctagaaattccacctgctgtattttcaatttcttcaaccaaaaacaacaaattacagAATGTGATTAAACTTGGAGAAGGGTTtatgaagcaaccagaagatgTTTGTGTTGATAAAGATGGTGTTTTATATACAGCTACAAGAGATGGTTGGATTAAAAGATTAGTTAAGAATGGCAATTGGGAGAATTGGAAGCATATAGATAGTTCTACTTTGCTTGGAATCACAACATCAAAAGATGGTGGTCTCATTGTGTGTGATACTAGTTTGGGTTTGCTCAAGGTTACAGAAGAAGATGGTTTCAGTGTTATCCTTTCACAAGTAAATGGTACTCAATTAATATTTGCAGACGATGTAATAGAAGCATCAGATGGAAATATATATTTCAGTGTTGGTAGTACTAAATTTAGTTTACACAATTGGCATCTGGATTTGCTAGAGGCAAGACCTCATGGACAACTTTTAAAGTACAATCCCATGTCAAATGAGACTGCTATTGTTCTTGATGATTTGTCTTTTGCAAATGGTGTTGCACTGTCCAAGGATGAAGATTATCTTGTAGTCTGTGAAACTTGGAAATTTAGGTGTGTGAAGCATTGGCTAAAAGGAATTAACAAAGGCAAAACTGATATCTTCATTGAAAACCTCCCCGGTGGACCTGACAATATCAATCTTGCTCCTGATGGCTCATTTTGGATCGCTTTGGTTCAAatagcttctgaaaaGTTGGGTTTTTTGCACACCTCTAAGGTATGCAAGCACTTGTTAGCTTCATTTCCAAGGCTATTTAATCTGATCAATAGTGCAACAAAGTCAGCATTGGTGGTAAATGTTGGAACTGATGGGAAGATTATCAGAAAGTTTGATGATATTGAAGGGAAGGTCATTAGTTTTGTAACTTCAGCTGTGGAATTTGAGGACCATCTTTACCTAGGTAGTCTTCATTCCGACTTTGTCGGAAAATTACCACTGCAAAGTGTAAACTAG 1095 0.3406 MASTIGCVTLTSSLVLAVLFALTVQVFYFSPIDPLLLEIPPAVFSISSTKNNKLQNVIKLGEGFMKQPEDVCVDKDGVLYTATRDGWIKRLVKNGNWENWKHIDSSTLLGITTSKDGGLIVCDTSLGLLKVTEEDGFSVILSQVNGTQLIFADDVIEASDGNIYFSVGSTKFSLHNWHLDLLEARPHGQLLKYNPMSNETAIVLDDLSFANGVALSKDEDYLVVCETWKFRCVKHWLKGINKGKTDIFIENLPGGPDNINLAPDGSFWIALVQIASEKLGFLHTSKVCKHLLASFPRLFNLINSATKSALVVNVGTDGKIIRKFDDIEGKVISFVTSAVEFEDHLYLGSLHSDFVGKLPLQSVN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02313 364 Pfam Strictosidine synthase 157 239 IPR018119 GO:0009058|GO:0016844
Tsu08g02313 364 SUPERFAMILY Calcium-dependent phosphotriesterase 38 360 - -
Tsu08g02313 364 PANTHER ABC TRANSPORTER PERMEASE PROTEIN-LIKE PROTEIN 12 361 - -
Tsu08g02313 364 Pfam Strictosidine synthase-like, N-terminal 50 91 - -
Tsu08g02313 364 Gene3D - 49 363 IPR011042 -
Tsu08g02313 364 PANTHER STRICTOSIDINE SYNTHASE-RELATED 12 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02313 Tsu-Chr8 32680882 32687126 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02313 - - mtr:MTR_2g042430 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g02313 08 32680882 32687126 Tsu08g02313 08 32680882 32687126 ECH