Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02306 ATGGGTTCTGAGAGTAACAACTTGGAATTTCTTAAAGAGATCGGTTTAGGTTCAACTAACATCGGTTCTTTCATCAATGGTCAATGGAAAGCCAACGGTTCTTCTGTTACTTCTGTCAATCCTTCTACAAATCAGACTATTGCTACGGTGACTGAGGCAACTGTGGAAGATTATGACGAGGGATTGCAAGCTTGCAGTGAAGCAGCTAAAACATGGATGActATTCCAGCACCAAAAAGAGGTGAGATTGTAAGACAGATTGGGGACGCATTGAGGGCTAAATTGGATCCTCTCGGTAGGTTGGTGTCTCTTGAGATGGGAAAAATTGTTGCAGAAGGAATTGGGGAAGTTCAGGAAATTATTGATATGTGTGATTATGCTGTTGGGCTAAGCCGACAATTGAATGGATCAATTATCCCATCAGAACGTCCAGATCATATGATGTTTGAGGTATGGAACCCACTAGGAATAGTTGGTGTAATCACCGCTTTCAACTTTCCATGCGCTGTTCTAGGGTGGAATGCTTGCATTGCACTAGTCTGTGGCAACTGTGTTGTTTGGAAAGGTGCTCCAACTACTCCATTGATAACTATTGCTGTGACAAAGCTAATATCTGAAGTTCTTGAGAAGAACAAATTACCCGGGGCTATATTCACATCTTTCTGTGGAGGTGCTGATATTGGGGAGGCAATATCGAAAGACACACGCATTCCATTGGTTTCATTTACCGGAAGCTCAAAGGTGGGCGCGATAGTCCAGAAAACCGTGACCGAAAGATTTGGCAAATGCTTACTCGAGCTAAGTGGTAACAATGCCATAATAGTCATGGATGATGCAGATATCAAACTAGCTGTACGCTCTATTTTCTTTGCAGCTGTGGGTACTGCTGGTCAGCGGTGTACAACCTGCCGTAGACTGTATCTGCATGAGAGTATTTACACAAATGTACTAGATCAACTTGCCGGACTCTACAAACAAGTCAAAATTGGGAATCCCCTGGAGAAAGGGACTCTCGTTGGGCCTCTGCATACTCGTTCTTCTGTGGAAAATTTCAAGAAGGGCATTGCAGCAATAAAATCCCAGGGAGGCAAGATCCTAACAGGGGGATCTGTATTAGAGTCAGAAGGAAACTTTGTCCAGCCAACAATTGTCGAGATTTCTTCAGATGCTGCTGTAGTTAAAGAAGAACTGTTTGCTCCAGTTCTCTATGTTATGAAATTTCAGAATCTTGAAGAAGCAATTGCCTTGAACAATTCCGTGCCTCAAGGATTGAGTAGTTCAATATTTACACAAACACCTAATACTATATTCAAATGGATTGGGCCAAGAGGGAGTGATTGTGGTATAGTAAATGTGAACATACCAACTAATGGAGCTGAGATTGGAGGTGCATTTGGTGGAGAAAAGGCAACTGGTGGTGGTCGCGAAGCAGGAAGTGACTCGTGGAAGCAATACATGCGCCGTTCTACATGTACCATCAATTATGGAAGTGAACTACCATTAGCTCAGGGAATTAACTTTGGTTAA 1527 0.4276 MGSESNNLEFLKEIGLGSTNIGSFINGQWKANGSSVTSVNPSTNQTIATVTEATVEDYDEGLQACSEAAKTWMTIPAPKRGEIVRQIGDALRAKLDPLGRLVSLEMGKIVAEGIGEVQEIIDMCDYAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAVTKLISEVLEKNKLPGAIFTSFCGGADIGEAISKDTRIPLVSFTGSSKVGAIVQKTVTERFGKCLLELSGNNAIIVMDDADIKLAVRSIFFAAVGTAGQRCTTCRRLYLHESIYTNVLDQLAGLYKQVKIGNPLEKGTLVGPLHTRSSVENFKKGIAAIKSQGGKILTGGSVLESEGNFVQPTIVEISSDAAVVKEELFAPVLYVMKFQNLEEAIALNNSVPQGLSSSIFTQTPNTIFKWIGPRGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02306 508 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 505 IPR044638 GO:0004029
Tsu08g02306 508 SUPERFAMILY ALDH-like 19 497 IPR016161 GO:0016491
Tsu08g02306 508 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 505 - -
Tsu08g02306 508 Pfam Aldehyde dehydrogenase family 32 488 IPR015590 GO:0016491
Tsu08g02306 508 CDD ALDH_F7_AASADH 26 496 - -
Tsu08g02306 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 36 485 IPR016162 GO:0016491
Tsu08g02306 508 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Tsu08g02306 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 460 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02306 Tsu-Chr8 32524817 32531184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02306 1 508 Acyl Lipid Metabolism Gene Families AT1G54100 80.118 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02306 K14085 - gmx:100811186 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g02306 08 32524817 32531184 Tsu08g02306 08 32524817 32531184 ECH