Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02243 ATGAGTTTCATCTTCGGAAAGAGAAAAACACCCGCAGaGCTTCTACGGGAAAACAAGAGAATGTTGGACAAATCGATTAGGGAAATTGATCGGGAGAGGCAAGGTTTACAAACTCAAGAGAAGAAATTGATTGCGGAGATAAAAAAAAGTGCCAAACAAGGCCAGATGGGAGCTGTTAGAGTCATGGCAAAAGATCTTGTTCGAACAAGGCATCAGATTGAAAAGTTTTACAAGCTAAAATCACAGCTGCAGGGTGTATCACTTAGAATTCAGACATTGAAATCAACGCAAGCAATGGGTGAGGCAATGAAAGGTGTGACAAAGGCCATGGGCCAAATGAATAGGCAGATGAATTTGCcaaatttacaaaaaatcatGCAAGAATTTGAGAGACAGAATGAGAAGATGGAATTGACGATGGAAGTGATGGGAGACGCAATAGACGATGCTTTGGAAGGggatgaagaagaggaagaaacaGACGAACTAGTGAACCAAGTTCTTGATGAGATTGGAATTGACATAAACCAAGAGCTTGTAAATGCACCATCATCAGCTGTTGCTGCCCCGGCTGCAAAGACTAAGGTACCTCAAGCTGAAGCTGCTGCAACCGATGATAGCGGGATAGATAGTGATTTACAGGCAAGATTAGACAACTTGAGAAAAATGTAG 672 0.4003 MSFIFGKRKTPAELLRENKRMLDKSIREIDRERQGLQTQEKKLIAEIKKSAKQGQMGAVRVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPNLQKIMQEFERQNEKMELTMEVMGDAIDDALEGDEEEEETDELVNQVLDEIGIDINQELVNAPSSAVAAPAAKTKVPQAEAAATDDSGIDSDLQARLDNLRKM 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02243 223 Gene3D - 6 181 - -
Tsu08g02243 223 Coils Coil 119 146 - -
Tsu08g02243 223 Pfam Snf7 17 186 IPR005024 GO:0007034
Tsu08g02243 223 Coils Coil 12 46 - -
Tsu08g02243 223 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 223 IPR005024 GO:0007034
Tsu08g02243 223 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02243 Tsu-Chr8 30837343 30842537 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02243 K12191 - gmx:100526885 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g02243 08 30837343 30842537 Tsu08g02243 08 30837343 30842537 ECH