Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02212 ATGCCCCATCGTAGTAACTCGTGGCACTCATCGCCACCGTTAATCAGTCCACCACTCCTCATCATTATACTCCCTATCCTCGCCTTAACCCTCCTTTTCCTCACCGTCCCTCCCCTTCTCTCCACTGCAACCACCATTCTCCAACACACCTCCCTCAAAACCAACTGGAACATGAACTCCCTCAACATTCTCCTCGTCGTCTTGGCCATCTTATTCGGCATTTTCTCTAGAAAAAACGACGACGATTCATCTTCTTCCCAGCAACAAATCCAAAACGACGCCGTTCCAGATCAAAACGACGCGTTCCGCAGAGGTTCAGTTTCAGAGTCGCAACAATGGTATGGATTTTCCAGTGATGAGAGAAAAGTGTTCGATGAAAGTTCGAATCAGTTACAGTCACCGGTTACCGGTGTTAACCGTTTGAGAAGGAGTAGTAGTTCTTATCCAGATCTACGTCAGATTGAAACCGGTGATGATCGTTACAAGTTTCGTttctttgatgattttgaaatcGAGAAACAGTTTCGTTCTCCGGCGAGAGCTACATTTTCTGTCTCCGACCACCGTAAACGGTTGCCGGAGTATCGAAGTCGACAAGAAGAATTACAAGAAGTTCACGTTAAGGAAATTCCGGTGGATACTCTTGAGATTCGTTCTTCTTCTCCGGTGATGTCGCGTTCACCTCCTTCGCCACCACCACCGCCTTCTCCACTGGTTTTATCTCGGCGTCGTTCAAACCAAATGCGTCGGAGTGTGGACAGTAGGAGTGAGATAACTGAGGTTGAAGATCAAGAGTTCACGAGGTTACAGTCTCGGCCGGATAATCCTCCGCCGCCGCCTTCGCTGTCGCCTCCACGGTTATCGGCGAAGACACGATCGGAGAAGACGGAGCGAAGGAAGAGTAATGTGAAGAGAGAGATAGCAATGGTTTGGGCTTCTGTACTTTCTAAtcagagaaagagaaagaagaagcagAGACAGAAAAACGATCACAATCACCGTTATGATAATGTTGAGGAATTAACAAACAATACGACAGCGCCACTGATGACTCCGCCGCCACCTCCTCCGCCACCTCCACCTTCAGTTTTTCAAAGTATATTCAGAAAAGGACTTGGCAAGAACAAGAAAATTTATTCAGTGCCAGCACCGCCACCACCTCCTCCGCCATCGAGGAGATCGTCTAGGCTGAAGAATCAAATCCCTCCACCGCCACAGACTCCTCCACCGGCATTACCACGCGGGAGAAGTAACACGAAGCCTCCATTACCGAACAAATCAGGCAACTTAATCAACGAGACGGTAAATGCCGGCAACCAGTCACCATTGATTCCAGTTCCACCACCTTTACCGCCATTCAAGCTACCGGCGATGAAGTTTGTAGTTCGCGGTGATTTTGTTAAGATACGAAGTAACCAGAGCTCGCGAAGTACATCGCCGGAGCGGGAGCATATTGATGTGGAAGTTTCAGAAACCACAACCGTTACTAATGCCGTTATGATGAATCATAACGGCAACGTGACTGAGTCCGTTTTCTGTCCAAGTCCCGACGTGAATGCGAAGGCTGCAACATTCATTGCTCGTCTCCGGGGAGAATGGAGGCTACAAAAGCTTAATTCCATCAAGGAGAAAGGCAATGCCTCATTGCCTCTTGCAAGAGATTAA 1665 0.4727 MPHRSNSWHSSPPLISPPLLIIILPILALTLLFLTVPPLLSTATTILQHTSLKTNWNMNSLNILLVVLAILFGIFSRKNDDDSSSSQQQIQNDAVPDQNDAFRRGSVSESQQWYGFSSDERKVFDESSNQLQSPVTGVNRLRRSSSSYPDLRQIETGDDRYKFRFFDDFEIEKQFRSPARATFSVSDHRKRLPEYRSRQEELQEVHVKEIPVDTLEIRSSSPVMSRSPPSPPPPPSPLVLSRRRSNQMRRSVDSRSEITEVEDQEFTRLQSRPDNPPPPPSLSPPRLSAKTRSEKTERRKSNVKREIAMVWASVLSNQRKRKKKQRQKNDHNHRYDNVEELTNNTTAPLMTPPPPPPPPPPSVFQSIFRKGLGKNKKIYSVPAPPPPPPPSRRSSRLKNQIPPPPQTPPPALPRGRSNTKPPLPNKSGNLINETVNAGNQSPLIPVPPPLPPFKLPAMKFVVRGDFVKIRSNQSSRSTSPEREHIDVEVSETTTVTNAVMMNHNGNVTESVFCPSPDVNAKAATFIARLRGEWRLQKLNSIKEKGNASLPLARD 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02212 554 MobiDBLite consensus disorder prediction 420 435 - -
Tsu08g02212 554 MobiDBLite consensus disorder prediction 127 152 - -
Tsu08g02212 554 MobiDBLite consensus disorder prediction 125 152 - -
Tsu08g02212 554 MobiDBLite consensus disorder prediction 401 417 - -
Tsu08g02212 554 MobiDBLite consensus disorder prediction 82 105 - -
Tsu08g02212 554 MobiDBLite consensus disorder prediction 216 435 - -
Tsu08g02212 554 MobiDBLite consensus disorder prediction 246 269 - -
Tsu08g02212 554 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 6 544 - -
Tsu08g02212 554 PANTHER COTTON FIBER (DUF761) 6 544 - -
Tsu08g02212 554 Coils Coil 321 341 - -
Tsu08g02212 554 MobiDBLite consensus disorder prediction 290 305 - -
Tsu08g02212 554 MobiDBLite consensus disorder prediction 225 239 - -
Tsu08g02212 554 MobiDBLite consensus disorder prediction 348 364 - -
Tsu08g02212 554 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02212 Tsu-Chr8 30268159 30270680 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02212 - - mtr:MTR_2g040580 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g02212 08 30268159 30270680 Tsu08g02212 08 30268159 30270680 ECH