Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02194 ATGGAAGGTGGAGTACCAGAAGCTGATGTCTCTGCCTTTAGAGAATGTTTATCACTTTCTTGGAAAAATCCTTATGTTCTTCGTCTTGCTTTCTCGGCCGGAATTGGTGGTTTTCTTTTCGGCTATGATACCGGAGTCATATCTGGAGCTCTTTTGTATATAAGAGATGATTTCAAGGCTGTGGATAGACAAACTTGGCTTCAGGAAGCAATAGTGAGTACAGCACTAGCTGGAGCAATCATAGGTGCATCAGTTGGTGGATGGATCAATGATAGATTTGGAAGAAAGAAAGCAATAATTCTTGCAGATACACTCTTTTTCATTGGATCAGTTGTTATGGCTGCTGCTATCAATCCAGTTATTCTCATTGTTGGCAGAGTATTTGTTGGTCTTGGTGTTGGAATGGCTTCAATGGCTTCCCCTTTATACATCTCAGAAGCTTCTCCAACTCGAGTTCGAGGAGCACTTGTTAGTCTCAATGGATTTCTCATCACTGGTGGACAATTCCTCTCCTATGTTATTAACTTGGCATTCACAAATGCACCAGGTACATGGAGATGGATGTTAGGTGTTGCAGCATTACCCGCCTTGACGCAAATTGTATTGATGCTTATGCTACCAGAATCACCTCGTTGGCTGTTCCGAAAGggaaaagaagaagaagctaaACAAATTCTAAGGAAGATATACCCTCCACAAGATGTTGAAGATGAAATCATTGCTCTAAAAGAATCAGTTGAAATGGAAACAAAAGACGATTCATCTTCAAACAAAGTTAgcataatcaaacttctgaaAACAAAAACAGTAAGAAGAGGATTATATGCAGGAATGGGATTACAAATCTTCCAACAATTTGTTGGAATCAACACAGTGATGTATTACAGTCCAACCATTGTTCAACTAGCTGGTTTTGCATCAAACAGAACAGCACTTTTATTATCACTTGTAACTGCTGGAATTAACGCATTTGGATCAATTTTAAGCATTTATTTCATTGATAAAACTGGGAGAAAGAAGCTTTTGTTGTTTAGTTTGTCTGGTGTTGTGGTATCTCTTGTTGTTTTAACTGTTGTGTTTCATCAAACAACAACTCATTCTCCTATGGTTAGTGAAATTGAAACTTCTCACTTTAATAATACTTGTCCTGATTATAGAACAGCTTTGGATGCTGCTAAATGGGATTGCATGAAGTGTCTTAAGGCTTCTCCTGAATGTGGCTTTTGTGCTTCTGCTGGTGATAAGCTCTTACCTGGGGCATGCTTAATTTCCAATGACACAACAGAAGACCAATGCCAAAAAGAGCAAAGACAATGGTACACAAGAGGGTGTCCTAGCCAAAATGGATGGTTAGCATTAATTGGTCTATCACTCTACATCTTATTCTTCTCACCAGGAATGGGAACAGTTCCATGGGTTGTAAATTCTGAAATATATCCATTAAGATACAGAGGAATTTGTGGTGGAATGGCATCAACATCAAATTGGGTTTCAAATCTTATTGTTGCACAATCTTTTCTATCATTGACTGATGCTATTGGAACTTCATACACATTCATGATATTCATATTCATCACTGTTGCTGCCATTGTTTTCGTCGTTGTTTTCGTGCCGGAAACTAAAGGACTTCCTATTGAAGAGGTTGAGAATATGTTGGAAAGAAGAACTTTGAATTTTAAGTTTTGGCAGAGGAATTCTGACTCTCATGATCAAGTGTTGACTCAAAAGAATGTGTCATTTTGA 1743 0.3746 MEGGVPEADVSAFRECLSLSWKNPYVLRLAFSAGIGGFLFGYDTGVISGALLYIRDDFKAVDRQTWLQEAIVSTALAGAIIGASVGGWINDRFGRKKAIILADTLFFIGSVVMAAAINPVILIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNGFLITGGQFLSYVINLAFTNAPGTWRWMLGVAALPALTQIVLMLMLPESPRWLFRKGKEEEAKQILRKIYPPQDVEDEIIALKESVEMETKDDSSSNKVSIIKLLKTKTVRRGLYAGMGLQIFQQFVGINTVMYYSPTIVQLAGFASNRTALLLSLVTAGINAFGSILSIYFIDKTGRKKLLLFSLSGVVVSLVVLTVVFHQTTTHSPMVSEIETSHFNNTCPDYRTALDAAKWDCMKCLKASPECGFCASAGDKLLPGACLISNDTTEDQCQKEQRQWYTRGCPSQNGWLALIGLSLYILFFSPGMGTVPWVVNSEIYPLRYRGICGGMASTSNWVSNLIVAQSFLSLTDAIGTSYTFMIFIFITVAAIVFVVVFVPETKGLPIEEVENMLERRTLNFKFWQRNSDSHDQVLTQKNVSF 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02194 580 Gene3D MFS general substrate transporter like domains 436 560 IPR036259 -
Tsu08g02194 580 PANTHER GENERAL SUBSTRATE TRANSPORTER 1 568 - -
Tsu08g02194 580 Pfam Sugar (and other) transporter 448 551 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu08g02194 580 Pfam Sugar (and other) transporter 30 366 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu08g02194 580 TIGRFAM SP: MFS transporter, sugar porter (SP) family 20 367 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu08g02194 580 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 541 IPR020846 GO:0022857
Tsu08g02194 580 Gene3D MFS general substrate transporter like domains 20 374 IPR036259 -
Tsu08g02194 580 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu08g02194 580 CDD MFS_HMIT_like 32 526 - -
Tsu08g02194 580 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 568 - -
Tsu08g02194 580 SUPERFAMILY MFS general substrate transporter 18 549 IPR036259 -
Tsu08g02194 580 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu08g02194 580 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu08g02194 580 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu08g02194 580 PRINTS Sugar transporter signature 453 474 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu08g02194 580 PRINTS Sugar transporter signature 476 488 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02194 Tsu-Chr8 29886081 29891407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02194 1 567 Organic Solute Cotransporters AT1G30220 71.454 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02194 K08150 - gmx:100783605 992.645