Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02143 ATGGTGGCAGCGCGATTGTCTTGTGAAGATGTTAAACAAAAAGGGTGGCTTCTTGATGGTTACCCTCGGAGTTTGGCTCAAGCGGAGAGTCTAGAGAAAATGCAGATACGACCTGATGTGTATATCGTATTAGATGTTCCTGATGAAATTCTGATCGACAGATGTGTTGGTAGAAGGCTAGACCCAGTAACTGGCAAAATATATCATCAGAAGTTTTTTCCACCGGAGACTGAAGAAATCAAAGCAAGGCTGGTAACTCGTCCAGATGACACCGAAGAAAAGGTTATGTCACGCCTGAAGATATATAAGCAAAACGCAGAAGCAGTATCTTCCTCTTACTCAAACATAACAAATAAGATTGATGGAAGCCGTCCTAAAGAAGAAGTTTTCAAAGATATTGAATCTTTCTTATCTCCATTGCAACAAGATAAAGTGAAAATAGTGAAATCTGGAGAAAAATCAATTCTTGATATCAAAAAGGGGAAAGCATCTTTGATCCAGGATAAATGGAGAGGAATTCCTACTAGATTAAATAACATTCCTCATTCTCGAGATATCCGGAAATATTTCTATGATGATGTGCTACTAGCTACACAGAGGGCTATCAATGATGGAAAAATTAGATTGAAGGTTGACATCAACATTCCTGAACTGAATCCAGAAATGGACGTTTATCGAATTGGCACCTTGATGGAACTTATTCGATCTCTTGCACTTTCATTTGCTGACGATGGGAAACGTGTAAAGGTTTGTGTACAAGGGTCAATGGGAGAAGGTGCTCTTGCTGGAATGCCATTGCAGCTTGCTGGAAGTCGAAAGATTTTAGAGTTCATGGATTGGGGTGATTATGGTGCAAAAGGAACATTCATCAACATTGGTTCTATAGGTGCGGCAGAGGTTGAAGAGAAAGATGACATGTATATCTTGGTGGCTCCTCAAAATGCTGTAGGGAATTGTATTATTGATGATTTAAGAGCAATGACTAGTGCTGCCGAACACAGACCTGTTATCCTGATCAATGCTAAGCTTAAGGATTTACCTGCTTCTAGTGGTATTATGCAAACAATGGGGCGAGACAAAAGACTTGAGTATGCAGCATCATTTGAAAGTTGCTATTTCTTTCGGCTTCTCTATTATGCAGGAACGCAGTATCCCATAATGGGAGCTCTCAGGATGTCTTATCCATACCGATACGAGCTGTACAAGAGAGTAGATGATTCACCTGGTAAAGAGAAGTATGTAATTTTGTCTACCTTTACTGAAAGGCCTACTATTGATGAAATTAATAACTCCTTTGAAGGAAAACCAAGAAATGAAAAAGGGAAAGCCTCAGGGTTTTGGGGCTTCTTGAGTGAGATGTTTTATGCATAG 1371 0.3975 MVAARLSCEDVKQKGWLLDGYPRSLAQAESLEKMQIRPDVYIVLDVPDEILIDRCVGRRLDPVTGKIYHQKFFPPETEEIKARLVTRPDDTEEKVMSRLKIYKQNAEAVSSSYSNITNKIDGSRPKEEVFKDIESFLSPLQQDKVKIVKSGEKSILDIKKGKASLIQDKWRGIPTRLNNIPHSRDIRKYFYDDVLLATQRAINDGKIRLKVDINIPELNPEMDVYRIGTLMELIRSLALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGSRKILEFMDWGDYGAKGTFINIGSIGAAEVEEKDDMYILVAPQNAVGNCIIDDLRAMTSAAEHRPVILINAKLKDLPASSGIMQTMGRDKRLEYAASFESCYFFRLLYYAGTQYPIMGALRMSYPYRYELYKRVDDSPGKEKYVILSTFTERPTIDEINNSFEGKPRNEKGKASGFWGFLSEMFYA 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02143 456 Gene3D - 1 150 IPR027417 -
Tsu08g02143 456 PANTHER NUCLEOTIDE KINASE 1 345 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu08g02143 456 PRINTS Adenylate kinase signature 16 32 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu08g02143 456 PRINTS Adenylate kinase signature 87 102 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu08g02143 456 SUPERFAMILY Microbial and mitochondrial ADK, insert "zinc finger" domain 57 86 IPR036193 GO:0004017
Tsu08g02143 456 PANTHER ADENYLATE KINASE 5, CHLOROPLASTIC 1 345 - -
Tsu08g02143 456 CDD ADK 1 129 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu08g02143 456 Pfam Adenylate kinase 2 115 - -
Tsu08g02143 456 ProSitePatterns Adenylate kinase signature. 16 27 IPR033690 -
Tsu08g02143 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 137 IPR027417 -
Tsu08g02143 456 Hamap Adenylate kinase [adk]. 1 138 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu08g02143 456 Pfam Domain of unknown function (DUF1995) 188 429 IPR018962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02143 Tsu-Chr8 29028321 29037619 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02143 K00939 - gmx:100818830 792.341