Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02137 ATGACCCATTTGACAGAAAGACAAAAAAGTAAAGTAGATAAATTTGTTGATCCATCCATGGAATTCAATATCAGTAAAAGAACAAGTGTGGTTGCTGCAGGGTCAGTGTGGGAGACCAGAATGAAAAACGATGAAGTTAAAGGTGGAATTAAAGTGTTCAAAGCACAAGAACAAAAACCTGATCAAGATGTAGGAGATTCTAAATTGAGAAGAACCTCAATTGGGTCTTCTAAGAGAAAAACATGGAGTCCAATTCAGATTTCCAAAGGTAAACCAGAGGAACAAtgctcttcttcatcttctgatggAATTAAGAAGACTCCAATTCGGAACAGAAAAATTGGTGATAAATTTCAGAGAAGCCCAATTCAATCAAGAAAGATAAGATCTGATGATAATACACATAAGGGTAGTGGTGAAGCAGAGGAATTGAGGAAGATTAAATCAGATCCAATCAACAAAAATCATTCTGGGTCTGTTACTGATTCAATTGAATTGAGGAAGTCGAATTCCGAGTTGGATCGAGTTCAAGATAATGAGCCAAAGAATGAAGTTGATGAATTGGATGATGGGTTTGAAAAGCTTGAAGCTGTGAATGATGAAAATTGTGAGGATTTTGATGTGTGCCAAGAGAAAGAGATATCAAACAATGTAGGTGTGGTTCAAAATTCACCTGAATTGATGGTTAAGGTGATTGGTgaaggtgatgatgatgatgttgttgacgAGGTTGTGGATGAAGAGATTCAAATTGCAATGGAAAATGAGAGCTTTGATGTGAAGGAAATCACTATTCCAGAAAATAATAATGTTGTTTTGAATCATCAAGAAAACAAGAAGGTTGTGAACGAATCAGAAGAACCAAAAAAGATTGTGAATGCACAAATGCGATTTCATCacaaaaatgaaagaagatcAGTTTCTGTACCTATTGCAGTGAAGCAATCTCCTACAATAAGAAGGAATTCAACAATTTACCAAAATTTCTCCAAACCCAATTCAAGTTCTAGTCCAAAGGAAGAAGAACATAGTAGCTTTCCACAAACCCAAAGCAAGTTGCAGAGTCTAGTGGATTTAATAATGTGGAGAGATGTTTCAAgatcagcatttgtgtttgGCATTGGAACATTCATTATAATCTCATCATCTTATGCAAGAGATATAAATTTGAGTCTTATCTCTGCAATCTCCTATGTAGGCCTTGTCTACCTTGCAGTTATCTTCCTCTATAGATCCCTAATTTGCAGGGGAGTCATAGATGTAGATGACTCAAATTATGTACTTGGAGAAAAAGATGCAATTTGGATGCTGAAATTGGTCCTACCTTACTTGAATGAATTTTTGTCAAAACTCAAAGCCCTTTTCTCTGGAGATCCTGGTACCACAATGAagTTGGCAGTTTTACTGTTTGTTTTAGCAAGATGCGGCAGTTTTATAACAATTTGGAAGATGGTTAAATTCGGCTTCTTTGGAGTTTTTATCGTACCAAAGATCTGCTCTTCGTATTCAGCACAGTTAACTGCTTATGCAAATTTCTGGATTCGTCGATTTCGAGATGCATGGGATTCATGCACTCACAAGAAAGCTGTGGCGCTTGGCATTTTCGGTCTTGTATGGAATTTGTCCTCGGTTGTTGCTCGCATTTGGGCAGTGTTCGTGCTATTTGTGGCATTCAGATACTATCAACAACACTATATAGTGAGGGATGAATGGGTAGAAGTAGAAGATGAAACATGGGAAGAAGCAGCTGTTGGACAGAAACAACCCAACTTGATTAATGCCACCAATAAAGTAAAGAAAGGATACTAA 1809 0.3516 MTHLTERQKSKVDKFVDPSMEFNISKRTSVVAAGSVWETRMKNDEVKGGIKVFKAQEQKPDQDVGDSKLRRTSIGSSKRKTWSPIQISKGKPEEQCSSSSSDGIKKTPIRNRKIGDKFQRSPIQSRKIRSDDNTHKGSGEAEELRKIKSDPINKNHSGSVTDSIELRKSNSELDRVQDNEPKNEVDELDDGFEKLEAVNDENCEDFDVCQEKEISNNVGVVQNSPELMVKVIGEGDDDDVVDEVVDEEIQIAMENESFDVKEITIPENNNVVLNHQENKKVVNESEEPKKIVNAQMRFHHKNERRSVSVPIAVKQSPTIRRNSTIYQNFSKPNSSSSPKEEEHSSFPQTQSKLQSLVDLIMWRDVSRSAFVFGIGTFIIISSSYARDINLSLISAISYVGLVYLAVIFLYRSLICRGVIDVDDSNYVLGEKDAIWMLKLVLPYLNEFLSKLKALFSGDPGTTMKLAVLLFVLARCGSFITIWKMVKFGFFGVFIVPKICSSYSAQLTAYANFWIRRFRDAWDSCTHKKAVALGIFGLVWNLSSVVARIWAVFVLFVAFRYYQQHYIVRDEWVEVEDETWEEAAVGQKQPNLINATNKVKKGY 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02137 602 MobiDBLite consensus disorder prediction 52 185 - -
Tsu08g02137 602 MobiDBLite consensus disorder prediction 52 68 - -
Tsu08g02137 602 ProSiteProfiles Reticulon domain profile. 356 519 IPR003388 -
Tsu08g02137 602 PANTHER RETICULON-LIKE PROTEIN B21 26 601 - -
Tsu08g02137 602 MobiDBLite consensus disorder prediction 324 348 - -
Tsu08g02137 602 PANTHER RETICULON-LIKE PROTEIN B17 26 601 IPR044647 -
Tsu08g02137 602 MobiDBLite consensus disorder prediction 76 105 - -
Tsu08g02137 602 MobiDBLite consensus disorder prediction 106 152 - -
Tsu08g02137 602 Pfam Reticulon 357 511 IPR003388 -
Tsu08g02137 602 MobiDBLite consensus disorder prediction 167 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02137 Tsu-Chr8 28894992 28903071 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02137 K20720 - gmx:100801188 631.713