Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02119 ATGGAGAAATCGGTCGCCGGTGATGACTTCAACTATCAATCCGGCTTCGGCAACCACTTATCTTCGGAAGCCATCGCCGGAGCTCTCCCGGTGGGACAAAACAGCCCCCTCATATGCCCTTTCGGCCTCTACGCCGAACAAATATCTGGCACCTCCTTCACCACCCCTCGCTCCCTCAACCTCTTcagctggCTTTATCGGATCAAACCTTCCGTGACTCACGAACCGTTCAAGCTTCGGGTTCCTTCTAATAGGAAAATTTTGAGTGAGTTTAACGATTCAAACAGTTCTACAAATCCAACTCAGCTTCGATGGAAACCAACAGATATACCTGATTCACCTACGGATTTCATTGATGGCTTATCCACCGTCTGTGGTTCTGGTAGCTCCTTCATGCGCCATGGATATGCTATTCACATGTACGCTGCTAACAAATCAATGGACAATTGTGCCTTTTGTAATGCTGATGGCGATTTCTTGATAGTTCCCCAACAAGGAAGACTCATCATCACTACTGAATGTGGAAGATTGAAAGTTTCACCTGGTGATACTGCTATAATACCTCAAGGTTTTCGTTTTCATGTGAATCTGCCTGATGGTCCCTCCCGTGGCTATGTTGCTGAAATTTTCGGTACTCATTTTCAACTTCCTGATCTGGGACCAATAGgtGCTAATGGTCTTGCTTCCCCAAGGGACTTCCTTGTTCCTACAGCATGGTTTGAAGATAAATCATATCCTGGATACACTATAGTGCAAAAGTTTGGCGGTGAACTATTTACTGCAGTACAAGATTTCTCTCCCTTCAATGTTGTTGCTTGGCATGGTAATTATGTTCCATATAAGTATGACCTAAGCAAATTCTGCCCTTATAATACAGTGCTGTACGATCACAGTGATCCATCAATTAATACTGTGTTGACAGCACCAACTGATAAACCTGGGGTGGCATTGCTTGATTTTGTCATTTTCCCACCCAGGTGGCTTGTTGCTGAGCATACCTTCCGACCTCCGTATTATCATCGCAATTGCATGAGTGAATTTATGGGTCTCATCCATGGTAACTATGAGGCAAAGGCTGATGGGTTTCTTCCAGGTGGTGCAAGTCTTCATAACTGTATGACTCCCCATGGTCCTGATACCAAGTCATATGAGGCCACTATTTCTCGTGGGAACAATGTAGGACCTCACAAGATCACCGACACATTGGCTTTTATGTTTGAGTCGAGTTTGATTCCCCGTATCAGCCGATCGGCTCTTGAATCTCCATTCCTGGATCATGATTATTACCAATGTTGGATTGGTCTAAGATCTCATTTCACAGTTCCTGAGACATCTCTTGGAAGCCTAACCTTGAACAATGGACAATAA 1368 0.4423 MEKSVAGDDFNYQSGFGNHLSSEAIAGALPVGQNSPLICPFGLYAEQISGTSFTTPRSLNLFSWLYRIKPSVTHEPFKLRVPSNRKILSEFNDSNSSTNPTQLRWKPTDIPDSPTDFIDGLSTVCGSGSSFMRHGYAIHMYAANKSMDNCAFCNADGDFLIVPQQGRLIITTECGRLKVSPGDTAIIPQGFRFHVNLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLASPRDFLVPTAWFEDKSYPGYTIVQKFGGELFTAVQDFSPFNVVAWHGNYVPYKYDLSKFCPYNTVLYDHSDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGNYEAKADGFLPGGASLHNCMTPHGPDTKSYEATISRGNNVGPHKITDTLAFMFESSLIPRISRSALESPFLDHDYYQCWIGLRSHFTVPETSLGSLTLNNGQ 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02119 455 Pfam Homogentisate 1,2-dioxygenase N-terminal 11 284 IPR046452 -
Tsu08g02119 455 Pfam Homogentisate 1,2-dioxygenase C-terminal 285 439 IPR046451 -
Tsu08g02119 455 PANTHER HOMOGENTISATE 1,2-DIOXYGENASE 8 440 IPR005708 GO:0004411|GO:0006559|GO:0006570
Tsu08g02119 455 Gene3D Jelly Rolls 272 410 IPR014710 -
Tsu08g02119 455 CDD cupin_HGO_N 103 211 - -
Tsu08g02119 455 PANTHER HOMOGENTISATE 1,2-DIOXYGENASE 8 440 - -
Tsu08g02119 455 TIGRFAM hmgA: homogentisate 1,2-dioxygenase 10 439 IPR005708 GO:0004411|GO:0006559|GO:0006570
Tsu08g02119 455 SUPERFAMILY RmlC-like cupins 9 440 IPR011051 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02119 K00451 - gmx:100801346 850.121