Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02070 atgagGGGTCCTTTAGGTGCAGTAATAGGAAGTTATACATCAAGTGATGGAGTTACTCAAATGGGTGGTGGAATCATTAAGCATAACAGAAAATGTAGAGATATCACTGCTCTTGTCATCTTTATTGCTTTTTGGATTGCAATGATTGTTAACTCCAGTTTTGGTTTTAACCAAGGAAACCCATTAAGGCTTACTTATGGGCTGGATTACAAAGGCAATGTTTGTGGGGACAAACATGCACATCCTGGTCTCGGTGAATTGGAGCTCAGATATTGGCAGAATCCTAACCAAGTTTATCAGACTGGATTGAAGGATAGTCAATTCAAACTGGTTGATGCCCGTAGTATATGCTTGTTGGACTGCCCTATTCCTTCTGATGATTCTCTTGAATGGGTGTGTGATTATCCGGAAGGAGATATTCGTCTTTCAATGGAAGATTGGATTAATAGGAACTATAATTATTATGAATTCCTTACACCTGAAATGAGAAACTCCTCTCTTCAACTTCAGGGCCCGTGTTATCCTGTTATATTTCCCAGCGTAAATGtttACTGGAGTTGCCAGTTTATTGCTCGAGCATCAAACACATCGCTGAAGCATTGGGAGCAGATGGGTGGTGTTAGCATCAATGAAGACATTGTTATTGATAAGTCAATTCACAAGTCTATTAATTCTCGGTCAGCTGTtttaaagAGGTACATGGCTGATATAGGAAAGGCATGGCCTGTGCTGATAGTTTGTGGAGGAATTTTGCCTGTTTTTCTATCTGTGATTTGGCTGATGATGATTCGGCATTTTGTGGCTGCAATGCCGTGGATAACAGTGGTTCTCTTTAATCTTCTAATAATATCAGTCACAATGTTCTTCTACATAAAAGCTGGATGGATTGGAAATGATGCTATTTCTCCCATCATTGGTGAGCATGACCCTTACATTAATGTATTTGGGAGGGAGTTGACTCATCTACGTGCTGTCACTGTACTTATGACCGCTATCAGTGTTGTTGCCATTCTTACTTCAATTGCTATTGTGCGACGCATCCTTATGGCAACATCTGTCCTAAAGGTAGCTGCAAAAGTGATTGGAGAAGTTCAAGCACTCATAATTTTTCCACTGATTCCGTACGCCACCCTTGCTGTGTTTTACATGTTTTGGACTTCAGCTGCTCTCCATTTATTCAGCTCTGGCCAGATTGTTCAGAACAACTGCAACTCTAACTGCTGCACATATGATCTTGTGGCAAAACGGGTGAACTGTGATCGTTGTTGTGGATATAGCATTCATTACACACCACATATCGGAATTTCCATTCTTTTTCACCTATTTGGGTGCTATTGGGCTACACAATTTTTCGTAGCGTCCTCATCAACAGTAGTTGCCGGATCTGTTGCCTCTTATTACTGGGCCCATGGTGAAACATCGCCTGAAATTCCATTTCTGTCAGTCTTTTCCTCCATGAAGAGGTTTATGCGTTACAGTATCGGATCTGTGGCTTTGGGTTCTATGATTGTGTCATTTGTAGAATCAATCCGGTTTCTGCTTGAATCTCTTCGTCGCAGACTAAAAGTATCTAGTCATGTGCATGACAGCTGGATAGGCAAGGCTGCATATCAATCTTCTCAATGTTTTCTCAGGTGTATTGAGTGGACAATCAAATCAGTAAACCGAAATGCTTACATAATGATTGCTATAACAGGCAAAAGTTTCTTTAGCGCGTCTTCTATTGCAACAGATTTGATCATGAATAACATACTAAAGATTGGGCGTCTTAATGTGATAGGAGATGTCATTTTGTTCCTTGGAAAACTGTGTGTCAGCCTTTCAAGTTCGGTTTTTGCATTCCTCATGTTAGACACACATAAGTACAGTTCTGGCCATAACAAGACCTCATCTCCACTCTTCCCTGTTGTGGTATGCTGGGCTCTAGGATACACTGTTGCAACTCTATTCTTTGCAGTGGTGGAGATGTCAATTGATACCATCGTTCTCTCATTCTGCcaagattctgaagaacaccaAGGGACAGCACAGTATGCTCCACCCCTTCTCATTGAAACTCTTGGTAACCAAAATGAGATGCATAGACTTACTCAAGGATCACAATGA 2106 0.4046 MRGPLGAVIGSYTSSDGVTQMGGGIIKHNRKCRDITALVIFIAFWIAMIVNSSFGFNQGNPLRLTYGLDYKGNVCGDKHAHPGLGELELRYWQNPNQVYQTGLKDSQFKLVDARSICLLDCPIPSDDSLEWVCDYPEGDIRLSMEDWINRNYNYYEFLTPEMRNSSLQLQGPCYPVIFPSVNVYWSCQFIARASNTSLKHWEQMGGVSINEDIVIDKSIHKSINSRSAVLKRYMADIGKAWPVLIVCGGILPVFLSVIWLMMIRHFVAAMPWITVVLFNLLIISVTMFFYIKAGWIGNDAISPIIGEHDPYINVFGRELTHLRAVTVLMTAISVVAILTSIAIVRRILMATSVLKVAAKVIGEVQALIIFPLIPYATLAVFYMFWTSAALHLFSSGQIVQNNCNSNCCTYDLVAKRVNCDRCCGYSIHYTPHIGISILFHLFGCYWATQFFVASSSTVVAGSVASYYWAHGETSPEIPFLSVFSSMKRFMRYSIGSVALGSMIVSFVESIRFLLESLRRRLKVSSHVHDSWIGKAAYQSSQCFLRCIEWTIKSVNRNAYIMIAITGKSFFSASSIATDLIMNNILKIGRLNVIGDVILFLGKLCVSLSSSVFAFLMLDTHKYSSGHNKTSSPLFPVVVCWALGYTVATLFFAVVEMSIDTIVLSFCQDSEEHQGTAQYAPPLLIETLGNQNEMHRLTQGSQ 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02070 701 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 698 - -
Tsu08g02070 701 Pfam Plasma-membrane choline transporter 328 670 IPR007603 GO:0022857|GO:0055085
Tsu08g02070 701 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 698 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02070 Tsu-Chr8 27426036 27431893 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02070 K15377 - gmx:100815939 1305.81