Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02062 atGGAGGATGAAAATGAACAATACGCCAAGGAATTGGAGGTGGCTGTGAGGATTGTCCACGTGGCATGTGCTTTGTGTGGGAGGGTTCAGGAGAAGCTCCTTGCGACTGAGGTTGTATCTAAAGAGGATGATTCTCCTGTTACTGTTGCAGACTTGAGTGTTCAAGCAATCACTAGTTGGTTCCTATCGAAAACATTCGGGGTTCAAAATGTGTCAATTATTGCGGAAGAAGACGTAGAAACTTTTTCCAAGGATGATTCAACAGGCTTACTAGAAGCTGTTGTGGATGCCGTCAACGAGTCTTTAACTTTTGCGTCTATGTATGGTCTTCAAAGTCCGGAGACAACTCTTGGAACATCAGAAGTTCTCGAGGCCATTGGCCGCTGCAGCTCAACGGGAGGCCCCAGCGGAAGGCATTGGGTACTTGACCCTGTTGACGGCACATTAGGATTTGTCCGTGGTGATCAGTATGCTGTTGCGCTGGCTTTGATTGAGGATGGAAAAGTTGTTCTTGGAGTTCTTGGGTGCCCCAATTACCCAGTGAAAACAGAATGGCTAAATTATCACTACCAGTATCACGAAACAACATCACAATTATCTCCAACAACTCCTGATGCCTGTGGAAAAGGATGTGTATTGTATGCAAAGAGAGGCAGTGGCGAGGCATGGTTGCAGTCATTGATTCCAGAAGATAAGACGCTAGAATGGTCAAACCATGCTAGACTTATTCGAGTTTCTTCTGTTGATGATCCATCATTGGCAACTCTATGTGAACCAGTTGAAAAGGCAAACTCAAACCATTCCTTCACAGCTGGCCTTGCTCACAGTGTAGGACTTAGAAAACAGCCCTTACGCGTTCACAGCATGGTAAAGTATGCAGCAATAGCAAGGGGAGATGCCGAGATATTCATGAAATTTGCAAAGTCTGGTTACAAGGAGAAGATATGGGATCATGCTGCCGGTGTTGTGATTGTTGAAGAGGCCGGTGGTGTGGTAACTGATGCCGGAGGACGCCCTCTAGACTTTTCAAAGGGAACATACTTAGAGGATCTTGACCGAGGCATAATTGCATGCTCTGGTGTCACATTGCACGGAAAATTGATTGATGCTGTTTATGCTAGTTGGGACTCCTCAAACTTATGA 1143 0.4567 MEDENEQYAKELEVAVRIVHVACALCGRVQEKLLATEVVSKEDDSPVTVADLSVQAITSWFLSKTFGVQNVSIIAEEDVETFSKDDSTGLLEAVVDAVNESLTFASMYGLQSPETTLGTSEVLEAIGRCSSTGGPSGRHWVLDPVDGTLGFVRGDQYAVALALIEDGKVVLGVLGCPNYPVKTEWLNYHYQYHETTSQLSPTTPDACGKGCVLYAKRGSGEAWLQSLIPEDKTLEWSNHARLIRVSSVDDPSLATLCEPVEKANSNHSFTAGLAHSVGLRKQPLRVHSMVKYAAIARGDAEIFMKFAKSGYKEKIWDHAAGVVIVEEAGGVVTDAGGRPLDFSKGTYLEDLDRGIIACSGVTLHGKLIDAVYASWDSSNL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02062 380 SUPERFAMILY Carbohydrate phosphatase 8 373 - -
Tsu08g02062 380 Pfam Inositol monophosphatase family 43 375 IPR000760 GO:0046855
Tsu08g02062 380 PANTHER PHOSPHATASE 5 380 - -
Tsu08g02062 380 ProSitePatterns Inositol monophosphatase family signature 2. 316 330 IPR020550 GO:0046854
Tsu08g02062 380 CDD PAP_phosphatase 11 373 - -
Tsu08g02062 380 ProSitePatterns Inositol monophosphatase family signature 1. 140 153 IPR020583 -
Tsu08g02062 380 TIGRFAM bisphos_HAL2: 3'(2'),5'-bisphosphate nucleotidase 8 379 IPR006239 GO:0006790|GO:0008441
Tsu08g02062 380 Gene3D - 6 235 - -
Tsu08g02062 380 Gene3D - 244 374 - -
Tsu08g02062 380 PANTHER PAP-SPECIFIC PHOSPHATASE HAL2-LIKE 5 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02062 Tsu-Chr8 27316439 27320862 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02062 K01082 - gmx:100814009 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g02062 08 27316439 27320862 Tsu08g02062 08 27316439 27320862 ECH