Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02061 ATGGGTGTCTCAAGCATGAATTGCCTAATATTTGTGATGCTTTTGTTTGTATTCAGCGAAATGCAAACGATTACAGGTGCAGGAGCAAAAGTAGAGAGTGTGAGTTGCAACTTTAGGAAGAGTCCATGCTttgcaaagaaaataaaatgccCTTCTGAGTGCCCTCTTAAATCATCATCTGACCCAAATGCTAAAATTTGCTATCTTGACTGTGCTTCTCCAGTATGCAAAGCTGAATGCAAATatCACAAACCAAACTGCAACGGTCGTGGATCAGCATGCTTAGATCCACGCTTTGTTGGAGCAGATGGAATAGTTTTCTACTTCCATGGAAGATCCAATGAACATTTCACCTTGGTATCTGATCAAAATCTTCAAATCAATGCACGTTTCATTGGCCTAAGACCTGAAGGTAGAACAAGAGATTATACATGGATTCAAGCACTTGGAATCCTCTTTGAATCTCACAAGTTTATTGTTGAAGCCACCAAAGCAACAACATGGAACGGCGAAATCGACCATTTGAAATTCTCTTACAATGGAGAAGAACTTCAAATTCCACAAGGTTACCTCTCTACATGGGAGATAGCACAAAAGAAAATTAGTGTAGAGAGAACATCAAGCATGAACAGTGTTGTTGTTAATGTTCAAGGTGTTGTTGAAATATATGTGAATGTTGTGCCTGTTACTAAGGAAGATAGTAGAATCCATAACTATCAAATTCCTGATAATGATTGTTTTGCTCACTTGGAGGTTCAGTTTAAATTCTATGATCTGTCTTCGAAAGTCGAAGGTGTTCTTGGAAGGACATACCAGCCAGATTTTGAAAATCCGGCGAAGTTAGGTGTGGCAATGCCTGTGGTTGGAGGGGAAGATAAATATAGAACTACATCACTTCTTTCTACTGATTGTGGTGCCTGTTTATTTGCTGGTAATGGTGAAGATTTTGAAAAGAAGAATTCAGTGATTGAATATGGTATGATGGATTGTAGAGGTGTTTCCAACAGTGGAAATGGTATAGTTtgcaaaagataa 1035 0.3758 MGVSSMNCLIFVMLLFVFSEMQTITGAGAKVESVSCNFRKSPCFAKKIKCPSECPLKSSSDPNAKICYLDCASPVCKAECKYHKPNCNGRGSACLDPRFVGADGIVFYFHGRSNEHFTLVSDQNLQINARFIGLRPEGRTRDYTWIQALGILFESHKFIVEATKATTWNGEIDHLKFSYNGEELQIPQGYLSTWEIAQKKISVERTSSMNSVVVNVQGVVEIYVNVVPVTKEDSRIHNYQIPDNDCFAHLEVQFKFYDLSSKVEGVLGRTYQPDFENPAKLGVAMPVVGGEDKYRTTSLLSTDCGACLFAGNGEDFEKKNSVIEYGMMDCRGVSNSGNGIVCKR 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02061 344 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 3 344 - -
Tsu08g02061 344 Pfam Root cap 253 309 IPR009646 -
Tsu08g02061 344 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-LIKE PROTEIN 3 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02061 Tsu-Chr8 27314282 27315906 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02061 - - gmx:100808294 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g02061 08 27314282 27315906 Tsu08g02061 08 27314282 27315906 ECH