Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01981 ATGTCCACACCACAAACCCACCTACTCGCCTACCCTTTCCCATCTTCCGGTCACATAATCCCCCTCATCGACCTTGCTAAAAACCTCATCTCTCGCAACATAAACGTCACCGTTTTATTAACTCCATCAAACCAACACCTACTTCCTACAAACTATTCCCCTCTTCTCCAAACCCTTCTTCTTCCATCACCTCAATTCCCAAACCCAAACCAAAACCGACTTATTTCCATAATCACTTTCATGCGCCAACATCACTACCCAATTATCCTTCAGTGGGCCCGGGTTCACCATTTACCTCCTTCAGCTATCATCTCTGACTTTTTTCTTGGTTGGACTCATCTCCTAGCACGTGACCTCCACGTGCCGCGCTTAGTTTTTTCCCCCTCTGGTGCTTTCGCGCTTTCTATATCTTTCTCCTTATGGCGTGACCTGCCTCAAAACGACAACCCTGATGACGCTAATTCTGTCGTTTCGTTCCCGAATCTACCGAATTCTCCGGTTTATCCCTGGTGGCAAATTTCTTATCTGTTTAGAGATAAGAAAGTGGAACAAGATTGGGAGATGATGAGAACTGTATATCTCTTTAATCTCGATGCTGCTTGGGGTGTTGTTTTCAACTCCTTCATTGATTTGGAACCAGCTTACTTTGACCACATAAAAAAAGAACTTGGACATGAAAGAGTTTGGGCCGTGGGCCCTGTTTTGCCACTTGATTCCGGTTCAAATACTGGACCGGAAGAAAGAGGTGGGGCCAGCACGGTCTCGGGCCAGGAACTCACCACGTGGCTCGATAAGCGTGAAGACCGGTCAGTTGTTTATGTTTGCTTTGGAAGTCGTACATTTCTCACGACAGCTGAGATGGATGTGCTGACAAGTGCATTGGAGTTAAGTGGGGTTCATTTCATATTTTCTGTGAGGGTTCCGGATGAACGACATGTGGATTGTGGTAAGATACCGAGTGGTTTCACCGAACGGGTGAGCGAAAGAGGGTTCGTCATTGAGGGATGGGCGCCGCAGTTGATGATATTGGGTCACCGTGCAGTAGGTTCATTCTTGACTCATTGTGGATGGAACTCCGTGTTAGAAGGGTTGGTTTCTGGTGTGGTGATGCTGACATGGCCAATGGGTGCGGATCAATATACGAATGCAAAGTTGTTAGTGGACCAGTTAGGTGTGGCGGTTCAGGCTGCGGAAGGGGATGAGAAGGTACCAGAAATAAGTGACCTTGTGAAGGTAATAAAAGGGTCTTTGGGAAGGACAAAGGAGAGAGTGCGAGCTGAAGAGTTTAGGGATGCTGCATTGGGTGCGATTAAGGAAAATGGAAGCTCTCAAAAACAGTTGGATGCTCTAGTGAAAGAGCTTAATGAACTTAAGAAGGACTAA 1383 0.4671 MSTPQTHLLAYPFPSSGHIIPLIDLAKNLISRNINVTVLLTPSNQHLLPTNYSPLLQTLLLPSPQFPNPNQNRLISIITFMRQHHYPIILQWARVHHLPPSAIISDFFLGWTHLLARDLHVPRLVFSPSGAFALSISFSLWRDLPQNDNPDDANSVVSFPNLPNSPVYPWWQISYLFRDKKVEQDWEMMRTVYLFNLDAAWGVVFNSFIDLEPAYFDHIKKELGHERVWAVGPVLPLDSGSNTGPEERGGASTVSGQELTTWLDKREDRSVVYVCFGSRTFLTTAEMDVLTSALELSGVHFIFSVRVPDERHVDCGKIPSGFTERVSERGFVIEGWAPQLMILGHRAVGSFLTHCGWNSVLEGLVSGVVMLTWPMGADQYTNAKLLVDQLGVAVQAAEGDEKVPEISDLVKVIKGSLGRTKERVRAEEFRDAALGAIKENGSSQKQLDALVKELNELKKD 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01981 460 Gene3D Glycogen Phosphorylase B; 258 457 - -
Tsu08g01981 460 Coils Coil 440 460 - -
Tsu08g01981 460 CDD GT1_Gtf-like 7 454 IPR002213 GO:0008194
Tsu08g01981 460 Gene3D Glycogen Phosphorylase B; 2 253 - -
Tsu08g01981 460 PANTHER UDP-GLYCOSYLTRANSFERASE 89C1 7 454 - -
Tsu08g01981 460 PANTHER GLYCOSYLTRANSFERASE 7 454 - -
Tsu08g01981 460 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 256 395 IPR002213 GO:0008194
Tsu08g01981 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01981 Tsu-Chr8 25808368 25809750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01981 5 457 Glycosyltransferase AT1G73880 46.526 1.05e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01981 - - gmx:100776416 657.907