Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01936 ATGATTACctattatgtttctttttttagatGTCAAAGGAAAAATGAGCaacttgaacaaaaaaaattgaatcaaaatgaagaagattatGAGATTGATAAGTTCACAGAAGAGATAGCTGATTTGATATTTCCAACCTATGAAGAAGATTTGCATATTGCAAGTgaagaaggaaaagaagaagaaacagagTACTCTGTTTTGGAAAAGATTGATTCTCATATTCAACAAGATGATGAGAAAGGTAAAGGAGAaatagatttatattttttgaaagaaaaaaactatgATTTGAATgaagattgtaaaaaaaataaagaagaaacaaaaggGTCTATTTTTAGGAGTAGTGTTTGTGATGATTTGAAGGAAGATGttaagaaaaatgatgaatatgaAACAGAGTGCTCTGTTTTTGAAGAGGGTGATTCCACTTCTCATCAAGATGGTAAAATGAGTGTAGAAGATgttgatgaagaaaaagaagaaacaaaaggGTCTATTTTGATTGATAATACCTATGTTGATACAACAAGTGAATGTAAATTTGTGCCACGAAAAGATTTTggtgattttgaagaagaacCTATGCGCTTAAGCTTCTCTTTCTTCAACAATGTTTCTTATGATAATGCATTTTCAAGCATTGAAAATATAGCCAAGATGGAAATATTGGAGCATATAGAGGAATTTCATGTTGATcaagaagaagttgaaaaggaATTTGTTCAAGAAAGTAGAAAATTCACTTCCAAGTTAAATGATGATTCTTTGACATATGAGATTGTAggttctaatattttttgtgaagAATTTGAGTGTGAAAGTCTTAAGAAAGTTGAAGATTTGGAGGAAACTCAAAAAATTTCATGTAGTAGAGAAGAAGTCTCACATGGTTTTTTTGAGTGTATAAATGAAAAGGAAGGTTCTTCATATCATGAAGAAGACACATTCCAAGATAGGTTCGAGAAAACCGAAGAAACAATGTATGAAGAAGAGTTTGATGAAATGgaatatgaagaagaagaagaagaagaagatgaggatGAATATGAGTGGGAGAATGATGAGGTAATGGAacaaataaaattggaaatgaaaAATGCAAGACAAGGAGGACTTGCAACAATTTTGGAAGATGATGTAGAAAGAGAGTACTCATCAAAAGTttttgaagagaaaataaaGCCATTGAGTATTGATGAGAAGATGGAATACAAAGATCACATTGTTGAAATTCAAAAGGTTTACAAATGCTATGCACAAAAGATGAGGAAACTTGATGTCTTGAATTATCAAGCAATGCATGCAATAGGTCTTCTTCAACTAAAAGACCCtcccaaattatttttaattctaaaatcaaCCATCCAACATGGCAAGCCTCTAATGATTCCTCAGAATTTGTGGCCACGCAAAGAACAAATTCACACATCTGATCCAATGTTGAAGCTTGTTAATGAATTGCATAGGGATTTTGAACTTGTTTATGTTGGCCAAATTTGTCTCTCATGGGAAATCCTATGTTGGCTACATGAGAAAATCAAAGAgttgaaaaaatatgattcaCAATGGCCTCGTAGGTATAATCTAGTTGCTggtgaatttcaactttttcatGTTCTTATTCAACGGTTCTTAGAGGACGAGCCATTTCAACAAGGTTATAGGATTCAAAATTATGTCAAGAATCGATGTGTCGTTCGCAATTTGATCCAAGTTCCAACCATTAAAGATGATAGTACAAAggataagaaaaaaattaagtggGGTGAAGAGAATGTAATTGCTTGTGAAAGGTTAGCACAAATAATTAAGGAATCCATGCAAATGTTTTGGGAGTTTGTCAAAGCAGATAAAGAGGATGGGAATGTGTTCCATAAAGTATCTCATCACAAAGGGAATGAGGGCAAGGACAAAGAAATTTCAGATCTTCTTGGAGATATCCAAACACAATTGCATAAGAAGGAGAGAAAGTTGAAGGACAAACTAAGAAGTGGAAATTGCATAGTAAGAAAGTTTCGAAAACACAATGAAGATCAAGTTCAGCTGGATCATGAGCAGTTGCTGGCTCAAGTGGGATTAAGGGAAGTGCAGTCTGACGAAGAGTGA 2112 0.2794 MITYYVSFFRCQRKNEQLEQKKLNQNEEDYEIDKFTEEIADLIFPTYEEDLHIASEEGKEEETEYSVLEKIDSHIQQDDEKGKGEIDLYFLKEKNYDLNEDCKKNKEETKGSIFRSSVCDDLKEDVKKNDEYETECSVFEEGDSTSHQDGKMSVEDVDEEKEETKGSILIDNTYVDTTSECKFVPRKDFGDFEEEPMRLSFSFFNNVSYDNAFSSIENIAKMEILEHIEEFHVDQEEVEKEFVQESRKFTSKLNDDSLTYEIVGSNIFCEEFECESLKKVEDLEETQKISCSREEVSHGFFECINEKEGSSYHEEDTFQDRFEKTEETMYEEEFDEMEYEEEEEEEDEDEYEWENDEVMEQIKLEMKNARQGGLATILEDDVEREYSSKVFEEKIKPLSIDEKMEYKDHIVEIQKVYKCYAQKMRKLDVLNYQAMHAIGLLQLKDPPKLFLILKSTIQHGKPLMIPQNLWPRKEQIHTSDPMLKLVNELHRDFELVYVGQICLSWEILCWLHEKIKELKKYDSQWPRRYNLVAGEFQLFHVLIQRFLEDEPFQQGYRIQNYVKNRCVVRNLIQVPTIKDDSTKDKKKIKWGEENVIACERLAQIIKESMQMFWEFVKADKEDGNVFHKVSHHKGNEGKDKEISDLLGDIQTQLHKKERKLKDKLRSGNCIVRKFRKHNEDQVQLDHEQLLAQVGLREVQSDEE 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01936 703 Coils Coil 13 33 - -
Tsu08g01936 703 PANTHER OS09G0413600 PROTEIN 8 698 - -
Tsu08g01936 703 PANTHER DUF1666 FAMILY PROTEIN 8 698 - -
Tsu08g01936 703 MobiDBLite consensus disorder prediction 333 352 - -
Tsu08g01936 703 Coils Coil 330 361 - -
Tsu08g01936 703 MobiDBLite consensus disorder prediction 140 163 - -
Tsu08g01936 703 Pfam Protein of unknown function (DUF1666) 491 698 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01936 Tsu-Chr8 24596322 24600536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01936 - - cam:101495282 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01936 08 24596322 24600536 Tsu08g01936 08 24596322 24600536 ECH