Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01931 AtgctttcaatttcaaactcaaTGGTAGTTGCTTCTTCTCTTTATTGTTCACCATCCTCATTATTACTACCTCGCACCACCCTCTTCCATTCCCACAAACTTCTTTCTTCATCAAATCAAACCTATGGATTTCTTCATCACCACCATTACCTTTTCAATTCTAAAAGGGTTCTTCCCTCTGTTTGCTTCTTCAATGCTAGAGAAGACAAATCTGACACCAAACTACAGGACAAGGACTCTGGATTGGAATGGCCTATCGTCAGGCGATGGGAGGTGCCTTGGGGATGGCAAACAGTTTCATTAACCTCTTTTGCTTGTGGATTAGGTTTTGTGTTGACAGGTTTGGTTGAGGCAACATCTCTACCATATCTAGGTATTCGGCCTGAGGTGCTAAGTTTAGATGAAAAGGCAGAGTTACTCTTTTTAGATCAGGGCATCACAACTGCTGCTGTACTTGGAATCATATATAGTGTTTTCAACACTTATCAGCCACTCCCTGAAGACTTCTTCAAATATGATTTAAGGGAACCTTTTAATCTTCAAAAGGGCTGGCTTCTGTGGGCTGGAGTTGGACTTGTTGGTGCCCTACTTGCCATTGGATTGACAGGATATGCTGTATCTTTCTTTAATGGAGAAACCCCACAAAGAGAGACTGATGCTCTTGTTCGCTTGCTTCCGTTAATTGGATCTTCAAGTGTCAGCACTGCTTGTTTGGTAGGAATCACTGGTGTTTTTGCTCCACTTCTTGAGGAGACCGTATTCCGAGGCTTTTTCATGACTTCCCTGACTAAGTGGGTTCCTACACCAGTTGCTATCATCATTAGTGCTGCTGTCTTTGCCCTCGCTCATCTCACTCCTGGTGAATTCCCCCAGTTGTTTGTTCTAGGGAGTGCTCTAGGGATTTCATATGCTCAAACTCGCAACCTTCTCACTCCCATCACTATCCATGCAATCTGGAATTCAGGAGTTATATTACTTCTCACTGTTCTCCAGGTATATTGTATAACATTATGCATGTATTTGCTAGTGCTTCATTGGGATTCAGGATCATTACAGTCAGAAAAAGCACACATTCAAGTAATCATTAAGTCAAAACCATTGGATAAAGATCAAACAGCTCATATTTTAAACTCGGTAAATTAA 1143 0.4103 MLSISNSMVVASSLYCSPSSLLLPRTTLFHSHKLLSSSNQTYGFLHHHHYLFNSKRVLPSVCFFNAREDKSDTKLQDKDSGLEWPIVRRWEVPWGWQTVSLTSFACGLGFVLTGLVEATSLPYLGIRPEVLSLDEKAELLFLDQGITTAAVLGIIYSVFNTYQPLPEDFFKYDLREPFNLQKGWLLWAGVGLVGALLAIGLTGYAVSFFNGETPQRETDALVRLLPLIGSSSVSTACLVGITGVFAPLLEETVFRGFFMTSLTKWVPTPVAIIISAAVFALAHLTPGEFPQLFVLGSALGISYAQTRNLLTPITIHAIWNSGVILLLTVLQVYCITLCMYLLVLHWDSGSLQSEKAHIQVIIKSKPLDKDQTAHILNSVN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01931 380 Pfam Type II CAAX prenyl endopeptidase Rce1-like 238 320 IPR003675 GO:0004222|GO:0016020|GO:0071586
Tsu08g01931 380 PANTHER CAAX AMINO TERMINAL PROTEASE 20 334 - -
Tsu08g01931 380 PANTHER CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN 20 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01931 Tsu-Chr8 24545413 24553224 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01931 K07052 - gmx:100816434 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01931 08 24545413 24553224 Tsu08g01931 08 24545413 24553224 ECH