Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01928 ATGGCAAAACCAAGTGCTGCTGATAATAGGACTAGAAGCTCTGTGCAGATCTTTATAGTAGTTGGTTTGTGCTGTTTCTTCTATATATTGGGAGCATGGCAAAGAAGTGGATTTGGAAAAGGAGATAGCATAGCATTAGAGATTACTAAGAATAATGCCGAATGTGATGTAGTTCCAAATTTAAGTTTTGATTCACACCATGCTGGAGAAGTTAGTCAAATCGATGAATCTGATTCAAAAGCTAAGGTGTTTAAACCGTGTGATGCTCGTTATACCGATTACACTCCGTGTCAAGATCAACGGCGTGCTATGACGTTTCCGAGAGAAAACATGAACTATAGAGAGAGACATTGTCCTCCAGAGGAAGAGAAGTTACACTGTATGATCCCTGCACCAAAAGGGTATGTAACACCTTTTCCATGGCCTAAGAGTAGGGATTATGTTCCTTATGCTAATGCACCCTACAAGAGTCTCACAGTCGAGAAGGCCATTCAGAATTGGATCCAATACGAGGGAAATGTGTTTAGATTCCCTGGTGGTGGAACCCAATTTCCTCAAGGTGCTGATAAATATATTGATCAACTTGCATCTGTGGTTCCTATAGATGATGGGACAGTGAGGACGGCGCTCGACACCGGTTGTGGGGTTGCAAGTTGGGGTGCATATCTCTGGAGTAGAAATGTTGTTGCCATGTCGTTTGCACCGAGAGACTCTCATGAAGCACAAGTGCAATTTGCTCTTGAAAGGGGTGTACCTGCTGTTATTGGTGTTCTTGGCACAATAAAGTTGCCATATCCGTCTAGAGCCTTTGACATGGCTCATTGCTCTCGCTGTTTGATTCCGTGGGGAGCAAATGGTGGAATATATATGATGGAAGTTGATAGAGTTCTAAGGCCTGGTGGTTATTGGGTGCTTTCTGGCCCTCCGATCAATTGGAAGGTCAACTACAAACCATGGCAGAGACCAAAGGAGGAACTCGAGGAAGAACAAAGGAGTATTGAAGAAGTTGCTAAGAAACTTTGCTGGGAGAAGAAGTCTGAGAAAGCTGAAATTGCCATTTGGCAAAAGACTATGGACTCTGAATCTTGTCGTAGCAGACAAGATGACTCCAGTGTAGAATTTTGTGCAGCATCAGATCCTGATGATGTCTGGTATAAGAAAATGGAGGCCTGCGTTACTCCGACACCTAAAGTTTCTGGTGGTGATCTTAAACCATTTCCAAACAGGCTATATGCGATCCCTCCTAGAGTTTCTAGTGGCTCTATTCCTGGAGTTTCTTCTGAGACATACCAGAATGATAACAAAGAATGGAAAAAGCATGTTAGTGCTTACAAGAAAATCAATTCACTCTTGGATTCCGGTAGATATCGCAACATTATGGATATGAATGCTGGTTTGGGTAGTTTTGCTGCAGCTATTCATTCGTCAAAGTCATGGGTCATGAATGTTGTGCCAACTATAGCTGAGAAAAGTACTCTCGGTGCGATATTTGAGCGAGGACTGATTGGCATCTATCATGATTGGTGTGAAGCCTTTTCCACATATCCAAGAACATATGATCTCATTCATGCTAATGGCCTCTTTAGTTTGTACAAGGATAAATGCAATACAGAAGACATTCTTCTCGAGATGGACCGGATTTTGCGACCAGAAGGTGCTGTCATAATCCGCGACGAAGTCGATGTATTAATTCAGGTAAAGAAATTAATCGGAGGAATGAGATGGAATATGAAATTGGTTGATCACGAAGATGGTCCTCTTGTTCCTGAGAAAGTACTAATTGCTGTTAAACAGTATTGGGTTACTGATGGAAATTCCACATCAACATAA 1830 0.4219 MAKPSAADNRTRSSVQIFIVVGLCCFFYILGAWQRSGFGKGDSIALEITKNNAECDVVPNLSFDSHHAGEVSQIDESDSKAKVFKPCDARYTDYTPCQDQRRAMTFPRENMNYRERHCPPEEEKLHCMIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQLASVVPIDDGTVRTALDTGCGVASWGAYLWSRNVVAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSRAFDMAHCSRCLIPWGANGGIYMMEVDRVLRPGGYWVLSGPPINWKVNYKPWQRPKEELEEEQRSIEEVAKKLCWEKKSEKAEIAIWQKTMDSESCRSRQDDSSVEFCAASDPDDVWYKKMEACVTPTPKVSGGDLKPFPNRLYAIPPRVSSGSIPGVSSETYQNDNKEWKKHVSAYKKINSLLDSGRYRNIMDMNAGLGSFAAAIHSSKSWVMNVVPTIAEKSTLGAIFERGLIGIYHDWCEAFSTYPRTYDLIHANGLFSLYKDKCNTEDILLEMDRILRPEGAVIIRDEVDVLIQVKKLIGGMRWNMKLVDHEDGPLVPEKVLIAVKQYWVTDGNSTST 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01928 609 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 597 IPR004159 GO:0008168
Tsu08g01928 609 PANTHER METHYLTRANSFERASE PMT2-RELATED 5 605 - -
Tsu08g01928 609 Coils Coil 323 343 - -
Tsu08g01928 609 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 443 559 IPR029063 -
Tsu08g01928 609 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 324 IPR029063 -
Tsu08g01928 609 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 605 IPR004159 GO:0008168
Tsu08g01928 609 Gene3D Vaccinia Virus protein VP39 159 372 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01928 Tsu-Chr8 24516023 24521090 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01928 - - gmx:100792999 1148.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01928 08 24516023 24521090 Tsu08g01928 08 24516023 24521090 ECH