Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01927 ATGTTTACTTTATCATCCACTTCCAAAACAAGCCTCCATCAAATACAAACTTTCAACACTCAAAATAACAATCTCCATGATGCTATTTTCTCTCCATACTTGAATATCAAAGAAGGGAACTATATAGGAAAAAATGGTGAATCAAGCCAAATAATTAACCCCTTTATCAACCACAGAAACTCTCCTCTTCACCAAGTGGGAAAAACAGAAGAAATCGGAGTTTTCGGAGCCGAAAAATATTTCAACAGAAGAGATGTTGATACTCCAAGAGTTGCTACAAAGTACCTTCCTCAAAGAGATGAATCAATGGCTATAGAAACTAGAAAATACCAAGTTGAATATGGAACTCCAAGTATTAGTTCTGTGTCAACATGGAATAGCCAAAGTTCACTTTTAAAGAGTGAAGTGAGAAATTCTTTAAGGAATAGTAAAGAAAAGGTGCATGCTAAGAGTGTTCTATCAAGTCTAGGTTTAAAATGTTCTTGTTCTGATAAGAATTCTGTTGATATCAGTGACCATGCAGGTGAAATCAGTTTCAATAAAAAAACTTCTAATGTTCAAGGcaaaacaacaccaaaaaaattgttcaatctTGGTTTAGATAATGATCTTTCAGTTAAAATAAGAAAGCCTAGTTCAGAACCTTTCATGAATAAAGATGTTTACTTTCAAAAGCAAGAGAAGTTAAGGGTAGGATTAAATAGTGAAAAGAATAGTTTGGCTTCTAACTCAAGAAACCATCTTGTCAAAATGCCAAGTCCATCATTAGATGAAGTAAAGACACCAAGAAAATCATTGGAAGTGTTTGGATCACCAAATCCAATAATGATCAATAACAAGAGAAGTTCTTCCTTGAGCATTAATGATAAAAGGTTGATATTTACTTCCAAAATGGAAGAAATTGATTCAAGTTatgttgatgataatgatgatgctGCAAGTGATGCAAGTTCTGATTTGTTTGAAATTGAGAGCTTCAAAGGAAAATCCTCCAACAATTTTCTCACTAGACAAACATCAGATGCTGCTTCAAGTTGTGTTAGCCCGAATAATTATGCTCCGAGTGAGGCAAGCATAGAATGGAGTGTGGTGACTGCAAGTGCTGCAGTTATGTCAGATTGTGAAGATCAAATGTCTGAGTTTACAATAAGGAGTCCAATAAAGACACCAATGAAGCCAAAGATCACTAGAGAGACACAAAGGCGGCGTCCCGGAACCTTGTTGGGATGCAAGAGCCACAAAGCTGTTAGAGTTGCTGGTGATGCCTTTATAACTTATGAGAAACAAAGTTTAAGTCCTAAAATTGGtaacagaaacaaaaacaatactAGTTCTCAAGTAGCAAGGTTTCCAGGAGAGACAAATATTGGTGCAAAAACAAGGCATGGACAACAACATGGTTATACCACACCACCATTGATGGCTTCTAACTCACCACATGCTTCAAAGTTGCTATACATTTAG 1464 0.3429 MFTLSSTSKTSLHQIQTFNTQNNNLHDAIFSPYLNIKEGNYIGKNGESSQIINPFINHRNSPLHQVGKTEEIGVFGAEKYFNRRDVDTPRVATKYLPQRDESMAIETRKYQVEYGTPSISSVSTWNSQSSLLKSEVRNSLRNSKEKVHAKSVLSSLGLKCSCSDKNSVDISDHAGEISFNKKTSNVQGKTTPKKLFNLGLDNDLSVKIRKPSSEPFMNKDVYFQKQEKLRVGLNSEKNSLASNSRNHLVKMPSPSLDEVKTPRKSLEVFGSPNPIMINNKRSSSLSINDKRLIFTSKMEEIDSSYVDDNDDAASDASSDLFEIESFKGKSSNNFLTRQTSDAASSCVSPNNYAPSEASIEWSVVTASAAVMSDCEDQMSEFTIRSPIKTPMKPKITRETQRRRPGTLLGCKSHKAVRVAGDAFITYEKQSLSPKIGNRNKNNTSSQVARFPGETNIGAKTRHGQQHGYTTPPLMASNSPHASKLLYI 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01927 487 MobiDBLite consensus disorder prediction 458 477 - -
Tsu08g01927 487 MobiDBLite consensus disorder prediction 456 481 - -
Tsu08g01927 487 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1 4 456 - -
Tsu08g01927 487 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 4 456 IPR039615 GO:0009638
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01927 Tsu-Chr8 24510386 24512185 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01927 - - gmx:100777748 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01927 08 24510386 24512185 Tsu08g01927 08 24510386 24512185 ECH