Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01923 ATGTGCTCTGGCATGGCTCTTTTAAGAAACAATGGTGAATTATTTCCGGAGAGAAGAGTCATTATTGATGCCGCTTTAAATTCTATTTCTAAAAGTGATCATGGCTCTAAAGTTTCACGTCGTGGTAGAAGGTTTGGAAGGATCACTAAACACCGAATTTTGCGCTGGATTATCCTCCTCTTGGCActcttttcaatatttttaacaGTTTATGGACTGAAAAAGTTTTTACAAGCTAAACTGGAATCCAGGTTCACAATACCACAACAAGATCTTCGGGGAGAACGTAGCCTACAAGAGAATAATTCTGTTGTACACAATGTTGAAAACCCACCTAAAAGCAAGCGTCGGAAGCATTTACCTTGTGATGTTGGACTTCGGCAATCAGTAGGTGTACTTATTGAacctaaaaattatataaacttCACACGGTTTTCTCTAGACTACGTTGACCGTGAAGAAAAAAGATCGAAAAATGACTTCTATGAACCTCGATTTGGAGGGCATCCAACTCTAGAGGAAAGAGAAAATTCATTTCATGTGAAAAACCAGACAATCCATTGTGGTTTTGTCAACGGGCCATCGGGATATCCAACCACGGGATTTGATATAGATGAAAAAGATAGAGCATACATGTCCAGCTGTAAGGTTGCAGTTTCTTCATGCATTTTTGGAAGCTCTGATTTTCTTCGGAGGCCTACAAATAGACTGATCAGTCAATATTCAAAGGACaatgtttgttttgttatgtTCTTGGATGATCAAACACTGGCCAAACTTTTGGCAGAAGGAAACCATCCTGATGAAAGAGGTTACATTGGCCTGTGGAAAGTAGTTATTGTAGAAAACTTGCCGTATAAGGACATGCGAAGAACCGGAAAGGTGCCAAAGTTTTTATCACACCGTCTCTTCCCAAATTCTAGGTATTCAATTTGGCTTGACAGCAAGATGCGACTCACATCTGACCCTATGCTgattattgaatattttttgtggCGAAGGAAGGCAGAATATGCCATTTCAAATCATTATGATCGTCACAGTGTCTGGGAGGAGGTACTCCAAAATAAGCGGTTAAATAAGTTCAACCACGCAGCAATTGATGAACAGTTTAACTTTTACGAGTCTGATGGCCTCCCCAAGTTTGAACCATCAAACCATAGTCTTCTACCGAGCTATGTTCCCGAGGGTTCCTTTATAGTCCGGGCCCATACACCAAtgtcaaatttattttcatgtcTTTGGTTCAATGAAGTTGATCGATTTACATCTCGTGATCAATTAAGCTTTGCTTATACTTATTTGAAACTCAGGAGAATGAATCCAGATAGACCATTTCAACTATATATGTTCAAGGATTGTGAACGTAGAGCATTGGCAAAGCTATTCCGGCACAGGGAAGTTCCATCTCCACCAGGGACTGTTTAG 1428 0.3824 MCSGMALLRNNGELFPERRVIIDAALNSISKSDHGSKVSRRGRRFGRITKHRILRWIILLLALFSIFLTVYGLKKFLQAKLESRFTIPQQDLRGERSLQENNSVVHNVENPPKSKRRKHLPCDVGLRQSVGVLIEPKNYINFTRFSLDYVDREEKRSKNDFYEPRFGGHPTLEERENSFHVKNQTIHCGFVNGPSGYPTTGFDIDEKDRAYMSSCKVAVSSCIFGSSDFLRRPTNRLISQYSKDNVCFVMFLDDQTLAKLLAEGNHPDERGYIGLWKVVIVENLPYKDMRRTGKVPKFLSHRLFPNSRYSIWLDSKMRLTSDPMLIIEYFLWRRKAEYAISNHYDRHSVWEEVLQNKRLNKFNHAAIDEQFNFYESDGLPKFEPSNHSLLPSYVPEGSFIVRAHTPMSNLFSCLWFNEVDRFTSRDQLSFAYTYLKLRRMNPDRPFQLYMFKDCERRALAKLFRHREVPSPPGTV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01923 475 PANTHER ALKALINE CERAMIDASE-RELATED 34 472 IPR006852 -
Tsu08g01923 475 Pfam Protein of unknown function (DUF616) 147 465 IPR006852 -
Tsu08g01923 475 PANTHER BNAA02G26630D PROTEIN 34 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01923 Tsu-Chr8 24466301 24472099 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01923 - - gmx:100807624 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01923 08 24466301 24472099 Tsu08g01923 08 24466301 24472099 ECH