Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01905 ATGCATTTACCTAGAATGGCTTCTAATGAATGCTTCATGTGTTCCGATAAGGAGTCCTTAGCGGTAGGTACTGAACTTCTTGTGTTTGGGAGGGAATTGCAATCGCATGTCATATATAGATACAGTCTTTTGACAAACTCGTGGGAATCCGGAATGAGGATGAATTTTCCAAGATGCTTGTTTGGATCTGCTAGCCTAGGAGAGATTGCAATTCTAGCCGGTGGTTGTGATTCAGAAGGACATATCCTCGACTCGGCTGAGCTCTATAATTCCGAGAATCAAACATGGGAAACACTCCCAAGCATGAACAAGCCGAGAAAGATGTGCTCAGGTGTGTTCATGGATggaaaattttatgttattggGGGAATTGGTGGGCGCGAGTCCAAGCTTCTTACCTGCGGTGAGGAGTACAACTTACAAACTAGAACATGGAAAGAAATTCCTAACATGTCCCCTGGGCGTAGTGCCAGGGGATCAGAGATGCCTGCTACGGCAGAGGCACCGCCTCTAGTTGCCGTTGTAAATAATGAATTATATGCTGCTGATTATGCTGACATGGAGGTTAAAAAGTATAATAAGGATAGCAAATTATGGGTTACGATGGGTAGATTACCGGAGCGAGCGGCGTCAATGAACGGATGGGGTCTTGCATTTAGGGCATGTGGAAATAGGCTAATTGTTATTGGTGGACCAAGGAGTCATGGTGAGGGTTTTATTGAACTCAATTCATGGGTGCCTAGTGAAGGTCCTCCACAATGGAATCTACTTGCAAGAAAACAATCTGGTAACTTTGTTTATAATTGTGCTGTGATGGGATGCTGA 825 0.4364 MHLPRMASNECFMCSDKESLAVGTELLVFGRELQSHVIYRYSLLTNSWESGMRMNFPRCLFGSASLGEIAILAGGCDSEGHILDSAELYNSENQTWETLPSMNKPRKMCSGVFMDGKFYVIGGIGGRESKLLTCGEEYNLQTRTWKEIPNMSPGRSARGSEMPATAEAPPLVAVVNNELYAADYADMEVKKYNKDSKLWVTMGRLPERAASMNGWGLAFRACGNRLIVIGGPRSHGEGFIELNSWVPSEGPPQWNLLARKQSGNFVYNCAVMGC 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01905 274 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 274 - -
Tsu08g01905 274 SUPERFAMILY Kelch motif 18 271 IPR015915 GO:0005515
Tsu08g01905 274 SMART kelc_smart 69 116 IPR006652 GO:0005515
Tsu08g01905 274 SMART kelc_smart 25 68 IPR006652 GO:0005515
Tsu08g01905 274 SMART kelc_smart 117 165 IPR006652 GO:0005515
Tsu08g01905 274 Gene3D - 6 250 IPR015915 GO:0005515
Tsu08g01905 274 Pfam Kelch motif 57 103 IPR006652 GO:0005515
Tsu08g01905 274 Pfam Kelch motif 105 152 IPR006652 GO:0005515
Tsu08g01905 274 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01905 Tsu-Chr8 24140516 24141340 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01905 - - gmx:100791897 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01905 08 24140516 24141340 Tsu08g01905 08 24140516 24141340 ECH