Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01851 ATGGGACTAGCTTTGGGTTGTCTTCAAGTGGAACAGTCAACGATTGCAATTAGAGAAGTTTTCGGGAAATATGAGGATGTGCTTGAACCTGGTTGCCACTGGGTGCCGTGGTGCATGGGTAGACAAATAGCCGGTTACCTTTCTTTGCGTGTGCAGCAGCTAGATGTTCGTTGCGAAACCAAGACAAAGGATAATGTTTTTGTGACTGTGGTTGCATCTGTCCAATATCGAGCACTGGCGGAAAAGGCAGTGGATGCTTTTTACAGACTTACCAATACCAGAGAACAGATTCAAGCTTATGTCTTTGATGTTATCCGGGCAACAGTTCCAAAAATGGGATTAGATTCTTCTTTTGAACAGAAGAATGAAATTGCAAAAGCTGTTGAGGAAGAACTTGAAAAGGCGATGTCTGCTTATGGATATGAGATAGTTCAGACTCTTATTGTGGATATTGAACCAGATGAGCATGTGAAGAAAGCCATGAATGAGATAAATGCTGCTGCAAGATTTAGGGCGGCTGCAAATGAGAAAGCTGAAGCAGAGAAGGTTCTGCACATCAAAAGAGCAGAGGGAGATGCAGAATCGAAGTATCTAGCAGGGCTTGGAATAGCTCGTCAGCGTCAAGCCATAGTGGATGGGCTGAGGGACAGTGTTCTAGCATTTGCTGAGAATGTCCCTGGGACATCATCAAAGGATGTCATGGACATGGTTCTTGTGACCCAATACTTTGACACATTGAAGGAGATTGGCGCATCGTCAAAATCCAATTCTGTTTTTGTTCCACACGGACCAGGTGCTGTAAAAGATATCGCTTCACAAGTCAGAGATGGTCTTCTCCAAGGGAATGTGGCTGGGCTTTGA 861 0.4448 MGLALGCLQVEQSTIAIREVFGKYEDVLEPGCHWVPWCMGRQIAGYLSLRVQQLDVRCETKTKDNVFVTVVASVQYRALAEKAVDAFYRLTNTREQIQAYVFDVIRATVPKMGLDSSFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKKAMNEINAAARFRAAANEKAEAEKVLHIKRAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFAENVPGTSSKDVMDMVLVTQYFDTLKEIGASSKSNSVFVPHGPGAVKDIASQVRDGLLQGNVAGL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01851 286 Pfam SPFH domain / Band 7 family 9 182 IPR001107 -
Tsu08g01851 286 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 284 - -
Tsu08g01851 286 SUPERFAMILY Band 7/SPFH domain 45 171 IPR036013 -
Tsu08g01851 286 Gene3D Band 7 domain 42 167 IPR036013 -
Tsu08g01851 286 Coils Coil 118 138 - -
Tsu08g01851 286 CDD SPFH_like_u4 10 278 - -
Tsu08g01851 286 SMART PHB_4 5 165 IPR001107 -
Tsu08g01851 286 PANTHER BAND 7 DOMAIN-CONTAINING PROTEIN-RELATED 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01851 Tsu-Chr8 22699134 22700655 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01851 - - gmx:100805558 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01851 08 22699134 22700655 Tsu08g01851 08 22699134 22700655 ECH