Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01806 ATGGAGTATTTCAACAAATCAAAGGCCGTAAAGCTACGAAGCCATTTAGGCAAGTATCTAGTAGCAGACGAAGAAAACAACAACCTCCGTCAAAGCCGAAAcggaacaacaaaaaaatcattatggTTAATCGAAATAGACAAAACAAAACCCAACCTGGTGCGTCTAAAATCCCACCACGGGCGCTACTTAACCGCAACAGACACACCTTTTCTCCTCGGCATGACCGGAAACAAAGTCGTTCAAGCTGATTATGATGCGGGTTTAAGCTGGAAATACGAATGGGAACCGATAAAAGAAGGATTTAGCAGCGTGAAATTGAGGAGTTGGTGTGGGAAATTTTTGAGAGGTAATGGAGGAACACCACCGTGGAGAAATTCTATTACACATGATGATCCTAGCACTGCTACACAAAATTGGATTCTTTGGGGTTTGGAGGTTGTGGAGTTATCACTGCTTAATGAGAATAATAATGAATTGTTGAATCAAAGTAGTTTTGCTTCAAATTCTTCGTTTGATTCTTGTGAAGATGTTCATGATTCTCAATCGGTTTCTACTTCTACAAAGAAGACGGGGTCTTTGTCTAAGACTCGTCAGAATTATAAATTGCAGAAAACTTCCAACCACAACAGCTTCACCAACTTCACCTCATCAATGGAACTTTTCCAACGAGCAAAAGCAGTTAGACTCAGAAGTCACCACGACAAATATCTCCACgcagaagaagatgaagaatcaaTCAACCAAGACAGAAACGGATCATCAAAAAACGCTAAATGGACAGTCGAACACATCCCTGAATATGATAACATCATCCGTCTTAAAAGCTGTTACGGTAAATACTTAACAGCATCAAATCAGCCTTTACTTCTCGGCGTCACGGGTCGAAAAGTGATTCAAACTCTGCCACGGAGACTTGATTCGTCTGTTGAATGGGAGCCGGTTAGAGAAGGTGCACAGGTTAAGCTGAAAACAAGATATGGGAATTTTCTTAGAGCTAATGGTGGATTACCACCTTGGAGAAATTCTGTTACTCATGATATTCCTCATAGAAGTTCTACTCAGGATTGGATTCTTTGGGATGTTGATGTTCTTGAGATTCATGTTGGAaatcctcctcctcctcctatTCCTCATTCTGATTCTCTTGATTTTGGATCTTCTACTTCTTTCAAATCTGATCGGTTTGCTAGACAAGAGTCAACAGATAGTGTTGGTTCGCCGCCGAAGTTGGAGGGGAGAACTATATACTACCATGTTGCTGAGGATAATGGAGATGTGGATGATGAGAACGTGCAGGGCTATTCCTTGGTCTTCAATGGGAATGATGTTGAGCAGTTGACTCGTAAGTTTGCGGAAGAGACAGGACTTGATGGAGTTATTGTGTGTAGTCGAAGTCCTTTGAATGGAAAACTTTACCCTCTTCGTTTGCATCTTCCTCCAAATAATGTTACCATGCAGGTTGTTTTGGTCCTTCCCAACTCAAAAGCTGCAAAAGACTTTGAAGAACAAGGTTTACTGTGA 1524 0.395 MEYFNKSKAVKLRSHLGKYLVADEENNNLRQSRNGTTKKSLWLIEIDKTKPNLVRLKSHHGRYLTATDTPFLLGMTGNKVVQADYDAGLSWKYEWEPIKEGFSSVKLRSWCGKFLRGNGGTPPWRNSITHDDPSTATQNWILWGLEVVELSLLNENNNELLNQSSFASNSSFDSCEDVHDSQSVSTSTKKTGSLSKTRQNYKLQKTSNHNSFTNFTSSMELFQRAKAVRLRSHHDKYLHAEEDEESINQDRNGSSKNAKWTVEHIPEYDNIIRLKSCYGKYLTASNQPLLLGVTGRKVIQTLPRRLDSSVEWEPVREGAQVKLKTRYGNFLRANGGLPPWRNSVTHDIPHRSSTQDWILWDVDVLEIHVGNPPPPPIPHSDSLDFGSSTSFKSDRFARQESTDSVGSPPKLEGRTIYYHVAEDNGDVDDENVQGYSLVFNGNDVEQLTRKFAEETGLDGVIVCSRSPLNGKLYPLRLHLPPNNVTMQVVLVLPNSKAAKDFEEQGLL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01806 507 SUPERFAMILY Actin-crosslinking proteins 223 364 IPR008999 -
Tsu08g01806 507 MobiDBLite consensus disorder prediction 177 200 - -
Tsu08g01806 507 PANTHER ACTIN CROSS-LINKING PROTEIN 1 179 - -
Tsu08g01806 507 PANTHER ACTIN CROSS-LINKING PROTEIN 207 504 - -
Tsu08g01806 507 Pfam Domain of unknown function (DUF569) 219 360 IPR007679 -
Tsu08g01806 507 Pfam Domain of unknown function (DUF569) 1 143 IPR007679 -
Tsu08g01806 507 Gene3D - 227 345 - -
Tsu08g01806 507 Gene3D - 5 144 - -
Tsu08g01806 507 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 179 - -
Tsu08g01806 507 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 207 504 - -
Tsu08g01806 507 SUPERFAMILY Actin-crosslinking proteins 5 143 IPR008999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01806 Tsu-Chr8 22066442 22072073 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01806 - - mtr:MTR_8g061880 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01806 08 22066442 22072073 Tsu08g01806 08 22066442 22072073 ECH