Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01780 ATGCTACTACGGTTCCCAGTTCcacttcaccttcttcttcGCCGTCACGACCACCATCAACCTTTGCTTCTCAACTCCGTACCATCCAAACGATTCAACTCACATATATTTTCCCAAAGTCCTCACTCCCTATTTCAAACCGTTCCCGTTTTGCGGGTCACAGGTTTGAATTCGCCGTCAACCTTTTCGGAGGATGAGTCGGACGTTGAACTTGGGCGTTTGCTGTCTCTTTTGCCGGAGGAGATGCGGAGGCGCGTGAGTGAGCATCCAGAGCTACAGATGTTGATCGAAGTGGTTATGGATTTAGGTCGGAAACCTTTGGCTAGGTTTCCTTCTGGCGATTTTGTTATATGGGATTATCCAATCACTGTTCAGGATATTCAGCACGCCACTGCTCAAGTTGGTGACTTTGCTGTTGATAATCGAGCAGGAATCAGCAGGACATTGCATCGGATTAGTGCTATTAGAAATCGTAAGGGCACAATTATTGGTCTTACTTGTCGGGTTGGTAGGGCAATTTCCGGAACTGCTAAGTTGTTGCAAGATTTGGTTCAAGACGGCTCTTCTTTGTTACTCATTGGGCCTCCTGGTGTAGGCAAAACTACAATCATCAGAGATATAGCTAGGATGCTTGCAAATGATTACAAGAAGCGTGTCATGATTGTTGACACATCCAATGAGATTGGGGGTGATGGCGATATACCTCATGCTGGAATAGGCACCGCTCGACGAATGCAAGTTCCCAACTCTGATATTCAACATAAGGTATTGATAGAGGCAGTTGAAAATCACATGCCACAAGTAATTGTAATTGATGAAATTGGTACGAAACTTGAAGCAATGGCTGCAAGTACAATTGCACAGCGTGGGATCCAGCTTGTTGCCACTGCTCATGGAATCACGATTGAGAATCTAATAATGAATCCTTCCTTAGAGATGCTTGTCGGAGGAATACAGAGTGTGACGCTCGGGGATGAAGAGGCCAGCCGCAGGGGTGTTCAGAAGACAGTACTGGAGAGGAAAGGCCCATCAACATTTAGTTGTGCAGTAGAGATTATTTCAAAGACACAGTTGCGCATTCATCGTAGCCTTGAATCAACTGTGGATGCTATTCTTTCAGGTCGTCTTCCAAATGTAGAAGTGCGCAGGATGAAGTCTCAAGAGCAAGAAGAGAGTGTACAAACAAGGCAAGATGCTCCAGAAATTGGTGGTGAAATTATGCTTGAGGATGCTCCAGAAAGGGCTGATGTCCAAACCAGGCAAGATGAATCACCTTTGATGTTGCCTATAGACATGTTAGAGAATTCTTGGGAGCACAAATTGCCACTTCGTCTATTTTATTATGGGAATGATCAGTAA 1359 0.4444 MLLRFPVPLHLLLRRHDHHQPLLLNSVPSKRFNSHIFSQSPHSLFQTVPVLRVTGLNSPSTFSEDESDVELGRLLSLLPEEMRRRVSEHPELQMLIEVVMDLGRKPLARFPSGDFVIWDYPITVQDIQHATAQVGDFAVDNRAGISRTLHRISAIRNRKGTIIGLTCRVGRAISGTAKLLQDLVQDGSSLLLIGPPGVGKTTIIRDIARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGTARRMQVPNSDIQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPSLEMLVGGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCAVEIISKTQLRIHRSLESTVDAILSGRLPNVEVRRMKSQEQEESVQTRQDAPEIGGEIMLEDAPERADVQTRQDESPLMLPIDMLENSWEHKLPLRLFYYGNDQ 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01780 452 Pfam Sporulation stage III, protein AA 164 316 IPR045735 -
Tsu08g01780 452 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 31 412 - -
Tsu08g01780 452 CDD AAA 187 276 - -
Tsu08g01780 452 PANTHER KINASE-RELATED 31 412 - -
Tsu08g01780 452 SMART AAA_5 186 317 IPR003593 -
Tsu08g01780 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 329 IPR027417 -
Tsu08g01780 452 Gene3D - 155 372 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01780 Tsu-Chr8 21659108 21665164 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01780 - - aprc:113864776 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01780 08 21659108 21665164 Tsu08g01780 08 21659108 21665164 ECH