Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01567 ATGGTGCTCGCTGGCAAGCTTAGTACTGAACTAGGGATCAAAACACCCGCTGAAAAAGTCTTCAAACTATTCTCATCAGAACTTCACGAAGTGCAAAACGCTTGTGAAAGAGTTCATCATACCAAGCTTCATCATGGTGAAGACTGGCATCACACTGATTCGATTAAGCACTGGACTTATGTCATAGATGGTGAAGTACACACATGTTATGATAGTCTTGAAGAAGTTGATGAACAGAACAAAAAGCTCAGTTACAAGCTTTTCGGTGGAGATATTGATAAGCACTATAAGGTCTTTAAGCTGATCATTGAATTTATTGATAAGGGTGACCATTCTGCTGTTAAATGGACTATTGATTATGAGAAGATTAATGACGACATTGATGCTCCAAATGGCTGGATGAACTTTCTTAGCAAATGCGCCAGAGATATTGATGCTCATCTTCTTAAAGACCTATAA 459 0.3856 MVLAGKLSTELGIKTPAEKVFKLFSSELHEVQNACERVHHTKLHHGEDWHHTDSIKHWTYVIDGEVHTCYDSLEEVDEQNKKLSYKLFGGDIDKHYKVFKLIIEFIDKGDHSAVKWTIDYEKINDDIDAPNGWMNFLSKCARDIDAHLLKDL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01567 152 SUPERFAMILY Bet v1-like 1 150 - -
Tsu08g01567 152 SMART Bet_v_1_2 2 151 IPR000916 GO:0006952
Tsu08g01567 152 PANTHER MLP-LIKE PROTEIN 423 1 149 - -
Tsu08g01567 152 PANTHER PATHOGENESIS-RELATED PROTEIN BET V I FAMILY PROTEIN 1 149 - -
Tsu08g01567 152 Pfam Pathogenesis-related protein Bet v 1 family 3 150 IPR000916 GO:0006952
Tsu08g01567 152 Gene3D - 1 150 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01567 Tsu-Chr8 18542633 18545011 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01567 - - mtr:MTR_8g045300 230.72