Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01514 ATGAGTGAGGAGAATATGAGAGAGCCAtcagaggaaaaaaaatactataaagaTTGTCCTGGTTGTAAGGTGGAACAATCCAAAGAGCTCAATCAAGGGGTATCCATTACAAATCTTTTCATCATATGGATTGTGGTGTTATGTTCAACACTGCCTGCATCATCACTCTTTCCATTCCTTTATTTCATGATTAGGGATTTTAAAATTGCAAAAGCCGATGCTGATATTAGTTACTATGCTGGTTTTGTAGGATCATCATTCATGCTTGGAAGAACATTAACATCTGTATTATGGGGAATGGTTTCTGATCGCTATGGTCGAAAACTTGTTATAATTTTCGGCCTTTTTGCAGTTGTGGTATTCAACACACTATTTGGCTTAAGTACAAGTTTTTGGATGGCTGTTATCACAAGATTTCTTCTGGGATGTTTAAATGGTGTAATGGGACCAATAAAGGCTTATGCTACTGAAATTTTTCGAGAAGAACACCAAGCTCTTGGACTCTCTACTGTTAGTGCAGCTTGGGGAACAGGTTTAATCATTGGACCAGCATTGGGAGGCTATTTGGCTCAACCAGCAGAGAAATATCCACATATATTTCCAAAGGGTTCCTTCCTGGACAAGTTTCCTTACTTCTTGCCGTGCGTTGTAATATCAGGAGTTTCATTTGTAGTAGTTATTGCCTGCTTGTGGATTCCGGAAACACTTCACAATCACGATGGTAGCAATGGTGATGAGTCTATAGGTGATGCTGAAGCTACAGAAAATGGAACCAACAAGGTTGATGAAGAAAAGACAgtacaaaaaaatgaaaatctcTTCATGAATTGGCCATTAATGTCATCTATCATTGCTTATTGTGTCTTCTCACTTCATGATATTGCATATCAAGAGGTTTTCTCTTTGTGGTGTGTTAGTCCTCAAAGTCTAGGAGGTTTGAACTTCTCAACTAATGATGTTGGTAATGTTCTTGCAATTTCAGGTCTAGCACTTGTGATCTACCAACTTACCCTATACCAGTATATGGCAAAAGCTTGTGGACCTGTTGGCATTGCCAGAATCACAGGGATATTTTCAATACCACTTTTGCAAAGTTACCCCTTCATAGCAATGTTGTCAGGCATAGCCTTATACATAGTCATTAGTATTGCTTCTGTCCTCAAGAATATTATCTCAGTATCAATTACAACTGGTTTATTCCTTCTACAAAACCGAGCAGTGGAACAACACCAAAGAGGAGCAGCTAATGGAATTTCCCTAACAGCTATGTCTCTATTCAAAGCTATTGGTCCTGCTACTGGTGGTACAATATTAACTTGGTCGCAAAAGCGCTTGGATGCTGCTTTTCTCCCAGGCACCCATATGGTTTTTTTCTTCCTGAATTTAGTCGAAGGACTAGGTATATTTATGTTGTTCAAACCATTCCttggagagaagaagaaaacacaGTCAGATCAGTTGCACTGA 1467 0.3756 MSEENMREPSEEKKYYKDCPGCKVEQSKELNQGVSITNLFIIWIVVLCSTLPASSLFPFLYFMIRDFKIAKADADISYYAGFVGSSFMLGRTLTSVLWGMVSDRYGRKLVIIFGLFAVVVFNTLFGLSTSFWMAVITRFLLGCLNGVMGPIKAYATEIFREEHQALGLSTVSAAWGTGLIIGPALGGYLAQPAEKYPHIFPKGSFLDKFPYFLPCVVISGVSFVVVIACLWIPETLHNHDGSNGDESIGDAEATENGTNKVDEEKTVQKNENLFMNWPLMSSIIAYCVFSLHDIAYQEVFSLWCVSPQSLGGLNFSTNDVGNVLAISGLALVIYQLTLYQYMAKACGPVGIARITGIFSIPLLQSYPFIAMLSGIALYIVISIASVLKNIISVSITTGLFLLQNRAVEQHQRGAANGISLTAMSLFKAIGPATGGTILTWSQKRLDAAFLPGTHMVFFFLNLVEGLGIFMLFKPFLGEKKKTQSDQLH 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01514 488 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 486 - -
Tsu08g01514 488 PRINTS Tetracycline resistance protein signature 168 190 IPR001958 GO:0022857
Tsu08g01514 488 PRINTS Tetracycline resistance protein signature 111 135 IPR001958 GO:0022857
Tsu08g01514 488 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 1 486 - -
Tsu08g01514 488 MobiDBLite consensus disorder prediction 242 261 - -
Tsu08g01514 488 Pfam Major Facilitator Superfamily 42 431 IPR011701 GO:0022857|GO:0055085
Tsu08g01514 488 SUPERFAMILY MFS general substrate transporter 38 480 IPR036259 -
Tsu08g01514 488 ProSiteProfiles Major facilitator superfamily (MFS) profile. 38 479 IPR020846 GO:0022857
Tsu08g01514 488 CDD MFS_SLC46_TetA_like 42 473 - -
Tsu08g01514 488 Gene3D MFS general substrate transporter like domains 36 463 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01514 Tsu-Chr8 17694740 17738636 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01514 - - gmx:100799583 766.918