Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01240 ATGACCTCAGAATCAAACTACTGCTGCATTTCCCACCAATTCTTCCAAACAGCATCCACAAACCCTAACAAAATCGCTGTAATTCATGCTTCCGCCGTCGCAAACCTTTCCCGCGAAAAATCCACTTCACCGAACTTCAACGGTGACATTACCACGCTCTTGCAACAGCGCGTCGAATCCACTTCTCCTCCACTTTACTGCGGTGATCGTAGCTTCACTTACTCTCATCTCTTGAACGCTGTTTCTTCTCTCAGCTATCGTCTCCGCTCTATCCTTAATGGTGCTGATGACCCGCACCTGATCACAGTCAAACCTCAAGGTAAAAATGGTGTCCACTGTGAAGAGGAAGCTGTCCAGACATCTGAGTCCTTGAAAACTGTCAAGCCTAGTGCAGAGTTAAGGGTTAACTCCAACAAAGAGTATAAGCCAAAGATAGTGGGGATATATATGGCTCCTTCTGTTGAATATATTATTGCTGTTCTTTCGGTATTGAGGTGTGGGGAAGCCTTCTTACCTTTGGATCCTTTTTGGCCAAACGAAAGGATACTGTCAGTTGCTTCTTCTTCAAATGCTGATCTCATTATCTGGTCCGAATCTTCATTTGGTAACAGTAATTTGGACCAGCTTGATGAATCACATTGGCTGTTAAAGTCGATTAGTTGTCCTGTTTTGAGCTACTCCATTGAAGAAAATCTGCAAGAATGTAGTTGTTCGACAGATTTGCCGTGGCCTTGTGccaatgaaaagaaaagatcttTTTGTTATCTGATGTATACTTCTGGATCATCTGGAAAGCCTAAAGGAGTGTGTGGTACTGAACAAGGTCTTTCAAACCGCTTTTTATGGATGCAAGGAATGTATCCTTTGATGGGGCAAGAGCTGTTGTTGTTTAAGTCGTCAATTAGCTTCATTGACCACCTGCAAGAATTTCTCAGTTCTATTTTGACTGCCTGTGTATTAATTATTCCTCCTTTCAGCAAGCTCAAAGAAAATGTATATTCCATAATTGATTTTCTACAGGCTTATTCTGTTAATAGGCTTACGGCTGTTCCATCACTAATAAGAACAATTCTTCCTGTATTGCAAACTCGTGCTGGCATGCGTGTTGAAAGTTCTCTGAAGTTACTTGTGCTAAGTGGTGAAACTTTTCCTTTTGCCCTGTGGGAGATACTTTCAACTATATTACCAAAGACAACAATCTTGAACTTATACGGAAGTACCGAGGTCGCTGGTGATTGTACATATTTTGATTGCAAGAGGATACCATTGATTTTGAAGGAAGAAATGCTAACAAGTGTTCCAATAGGTTTACCCATTACCAACTGCAATGTACAGCTTATTGGTGAAAATAGTGCATCAAATGAGGGTGAGCTATATGTTGGCGGTTCTTGCATTTTTAGGGGTTACTACCATGAATCTGATGGATTTGTAAAATTGCCTCAAAGTTATGGTTGTGAAGATATTGTTGATGCTTGCCAAACCCAATTATACTTTAAAACTGGTGATTTAGTCAAACAGTTGCCAACTGGTGATTTTATATTCTTGGGAAGAAAAGACCGTATTGTAAAAATCCATGGGCAACGTATTGCCCTAGAAGAAGTTGAAAATATTCTAAGGGAACATCCATATATAAATGATGCTGCTGTAGTTTGTCGAAATCTTCAAGCAGAGCTTGTGCTTATTGAAGCTTTTATAATATTGAAGGACAAACAACAATTGGGTGAATCATTAGTACCTGCAATCAGGAGTTGGATGAGTAACAAACTTCCATCAGTTGTGCTCCCTAACCGTTTCATCTTTACAGAATCATTTCCTGTGTCTTCTAGTGGTAAGATTAATTATGAGTCATTGGTTAGCTCAGCATTATTGACTAAGAATTTCAAGGATAAGATTGGCAACATTAGCTGCAGCGATCTGCTGCAACTTATTAAAAAGGCGTTTCACGGTGCTTTAATGGTTGAAAAGTTATGTAATGGTGATGATTTCTTTATGATGGGTGGTAACTCTCTTTCTGCTGCACATGTTGCTTACAATTTGGGGATTGACTTGAGATTTCTTTACTACTATCCAACTCCTTTTAAGCTTTGTATGGCTCTTCTCCAAAAAAGAGGATTGTGTTCTTTGCATAACAACTTGGATAAATGTTTGCAATTAGATGCAGACAAACAAAATAACCCTTTATCTTCCAGTCATACGGAAAATTCAATTCCTCTTCAGTTAAGGATGTTTCCTAAAGATAATGTTGATGTTTTGTTCCCTTCTAAGCGCTTAAAAAGGGGTTCTACAGATGTTACATCAGGGGGAAATGAACCATTTCCTTGGCATTCCCCTTCAATATTCTCATCATCTTCATTTAGCCGATGCAACAAGGTGCTGTATGAAGGGAAAACTTCTGTAATGGATACACGCCAAACAACAACATGGCCAGTCAATGCTCCAAGAGGAAGCAGAGGTCACATGAAGAGCTTTTGGAAAGTTAACATGGAATCTTGTGTTGATGCTTCTCCCATGGTTGTGTCTAAAGGCtcagatatttatttattcattggATCTCACTCACACAAATTTCTCTGCATAAATGCTAGAAGTGGTTCTATACAGTGGGAGACCAAACTAGAAGGTCGGATTGAATGTACATCAGCGATTGTTTCTGATTTTTCCCAGGTGGTTGTTGGATGTTACTTgggaaaaatttattttcttgatttttggAATGGACAAATCTACTGGACTTTTCAAACATCTGGTGAGGTTAAATCACAGCCAGTTATAGACACATGCAGACAATTGATCTGGTGTGGCTCGTATGATCATAACTTATATGCCCTTGATTACAAAAATCATTGTTGTGTCTATAAGCTACCATGTGGAGGTAGTATATATGGGTCACCTGCAATTGATGAGGCTCGCAGCGTGCTTTATGTGGCCTCCACTGGTGGTCGTATAACAGCCGTATCAATATCAGCTTTGCCTTTTAGTATATTGTGGCTACTTGAATTAGAAGTCCCCGTGTTTGGTTCTCTGGCTGTCACCCAAAATGGAACTGTAATATGTGGCTTGGTAGATGGCCATGTTCTTGCATTGGATCCAAAAGGGTCCATCGTTTGGAAGAAAACAACTGGTGGTCCAATTTTCGCTGGGCCGTGCATGCCTTCTTCTCTTCCTCATGAGGTGCTTGTATGCTGCAGAAATGGAAGTGTGTACTCATTCAAACTGGAAAAGGGAGATCTAATATGGGAATATAATGTTGGAGATCCAATTACTGCATCTGCTTATGTTGAGGAGCACTTGCAGCTGGAATCTGATGCCTCCAACACTTCGGACAGGTTAATTTGCATTTGTTCTAGTTCCGGAAGCATACACATTCTTCGAGTGAACACAAATTTATCCGAAGATACAAATCAAATAACAAGCGAAGTGCAAGAATTTGCAAGACTTAACTTGCCGGGGGATATATTCTCGTCGCCTTTAATGATTGGTGGTCGGATTTTCGTTGGTTGTAGGGATGATTACTTGCACTGTGTTTCCCTTGAAATTCCAAAGCAACATGGAACTTAG 3558 0.3952 MTSESNYCCISHQFFQTASTNPNKIAVIHASAVANLSREKSTSPNFNGDITTLLQQRVESTSPPLYCGDRSFTYSHLLNAVSSLSYRLRSILNGADDPHLITVKPQGKNGVHCEEEAVQTSESLKTVKPSAELRVNSNKEYKPKIVGIYMAPSVEYIIAVLSVLRCGEAFLPLDPFWPNERILSVASSSNADLIIWSESSFGNSNLDQLDESHWLLKSISCPVLSYSIEENLQECSCSTDLPWPCANEKKRSFCYLMYTSGSSGKPKGVCGTEQGLSNRFLWMQGMYPLMGQELLLFKSSISFIDHLQEFLSSILTACVLIIPPFSKLKENVYSIIDFLQAYSVNRLTAVPSLIRTILPVLQTRAGMRVESSLKLLVLSGETFPFALWEILSTILPKTTILNLYGSTEVAGDCTYFDCKRIPLILKEEMLTSVPIGLPITNCNVQLIGENSASNEGELYVGGSCIFRGYYHESDGFVKLPQSYGCEDIVDACQTQLYFKTGDLVKQLPTGDFIFLGRKDRIVKIHGQRIALEEVENILREHPYINDAAVVCRNLQAELVLIEAFIILKDKQQLGESLVPAIRSWMSNKLPSVVLPNRFIFTESFPVSSSGKINYESLVSSALLTKNFKDKIGNISCSDLLQLIKKAFHGALMVEKLCNGDDFFMMGGNSLSAAHVAYNLGIDLRFLYYYPTPFKLCMALLQKRGLCSLHNNLDKCLQLDADKQNNPLSSSHTENSIPLQLRMFPKDNVDVLFPSKRLKRGSTDVTSGGNEPFPWHSPSIFSSSSFSRCNKVLYEGKTSVMDTRQTTTWPVNAPRGSRGHMKSFWKVNMESCVDASPMVVSKGSDIYLFIGSHSHKFLCINARSGSIQWETKLEGRIECTSAIVSDFSQVVVGCYLGKIYFLDFWNGQIYWTFQTSGEVKSQPVIDTCRQLIWCGSYDHNLYALDYKNHCCVYKLPCGGSIYGSPAIDEARSVLYVASTGGRITAVSISALPFSILWLLELEVPVFGSLAVTQNGTVICGLVDGHVLALDPKGSIVWKKTTGGPIFAGPCMPSSLPHEVLVCCRNGSVYSFKLEKGDLIWEYNVGDPITASAYVEEHLQLESDASNTSDRLICICSSSGSIHILRVNTNLSEDTNQITSEVQEFARLNLPGDIFSSPLMIGGRIFVGCRDDYLHCVSLEIPKQHGT 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01240 1185 Gene3D - 99 518 IPR042099 -
Tsu08g01240 1185 Gene3D - 990 1179 IPR015943 GO:0005515
Tsu08g01240 1185 Gene3D - 797 989 IPR015943 GO:0005515
Tsu08g01240 1185 SUPERFAMILY Acetyl-CoA synthetase-like 60 618 - -
Tsu08g01240 1185 ProSitePatterns Putative AMP-binding domain signature. 256 267 IPR020845 -
Tsu08g01240 1185 SMART ire1_9 880 913 IPR018391 -
Tsu08g01240 1185 SMART ire1_9 1008 1039 IPR018391 -
Tsu08g01240 1185 SMART ire1_9 1052 1082 IPR018391 -
Tsu08g01240 1185 SMART ire1_9 839 871 IPR018391 -
Tsu08g01240 1185 Pfam PQQ-like domain 906 945 IPR002372 -
Tsu08g01240 1185 Pfam PQQ-like domain 970 1176 IPR002372 -
Tsu08g01240 1185 Pfam AMP-binding enzyme 145 524 IPR000873 -
Tsu08g01240 1185 CDD A_NRPS 144 617 - -
Tsu08g01240 1185 Gene3D - 519 628 IPR045851 -
Tsu08g01240 1185 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 820 1178 IPR011047 -
Tsu08g01240 1185 Pfam AMP-binding enzyme C-terminal domain 533 611 IPR025110 -
Tsu08g01240 1185 PANTHER EBONY 6 1178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01240 Tsu-Chr8 13835227 13847598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01240 255 612 Acyl Lipid Metabolism Gene Families AT5G36880 22.432 1.83e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01240 K00142 - gmx:100820175 1878.6