Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01232 ATGAACGGCGGTGGAGGTAACTTCCCTCCGTCGCAATCCAACGGCGGCGATttccttctctctcttcttcaaAAACCTCGTCCTCCTCAACCATCATCCACTCCGCCTCAACAATCTGTCACCATAGATCCTGCTGTCGCCATGATGGGTCCCACAATCCCCTTCTCTACATCACAATATCAATCCAACGGTCACGATCATCTTAATCTTCATccccttcatcatcatcttcatcagaaCCAGAATCTTCCACCATGGTCCCACACACCTTCTTCTTCTTACCCGCAAAACTCATTCGGGTTACTCCATAACCCGTTTTCACTTCCTCGGGTACCCGAAACCCATTTCAACACCACCACAAACACCACCACTCCACTTCACTTCTCTAACGGTCTTTCCCTCGCCGACGATCTACGAAGATTAGGGTTTCCAATTGAAACTAACAACAATAACAGTTTCATTCACCATcatcagcagcaacaacaacaacagcaacaacacgAATTGAAGTTACAGTTTGGGTCTTTACCAACAGTTTCTTATGCTAATACTTCCTCTGAAGTTTCTTCCAATGGAAGCTTCAATGGTTTTGATAGGAATGGGGTTATTGGGAATTTTAGGTCAACTGAACAGATTAGGGTTCCACCTGGATTTGGGAACAATGTAAGGGGAACAGGTTACGGGGGTACAGAGGTTGGTGATGGTGAATTGTATAGTAAGAGGGAGAATGTGAGATTAGGGTTTGGTGAAAGGAGTGATATTAGAAACAATGTGGGTCATGAATTGAGGCTTCCTGATCAGCTTGATAATCCTGGTCCACCTTCTGGGAGTGAACTTCATTCTGATTATGTTGATGTTGATGCTATTGGTGAACAGATAGCTGATTCGTTGTTGCTTGAGGAGGAGCTTGATGATAAGAGTACTAACGCTACGAAACGACATGGTCCTAAGGAGAAGGATGCTAGATTTTCAGACTCAAGAGGAAAGCAGTTGCTAAGCCAACGGGCAAGAACGTTTAAAAGACAAATGATGTGCCGTAGGGATATAGATAGTCTTAGTGTTCCTTTCCTTTCAATATTTGAATCTCTAATACCACCGGAAGAAGAAAAACTGAAGCAGAAGCAATTGTTAGGGTTATTGGAGAAGTTAGTTTGCAAGGAGTGGCCAATGGCTCGGCTTTATCTCTATGGATCATGTGCTAATTCTTTTGGTGTTTCTAAAAGCGACATTGATGTTTGCCTTGCTATTCAAGAAGCTGATATGGACAAGTCTAAGATTATAATGAAATTGGCTGATATTTTGCAATCAGATAACCTACAGAATGTTCAGGCATTGACACGAGCAAGGGTTCCAATAGTAAAGCTCATGGATCCAGTTACAGGAATCTCTTGTGATATATGCATTAACAATCTCCTGGCTGTTGTAAACACAAAGCTTCTTCGCGATTATGCAAACATTGATTCAAGGTTACGGCAGCTTGCTTTTATCATTAAACATTGGGCAAAGTCAAGAGGTGTCAATGAAACATACCATGGGACCTTATCTAGCTATGCGTATGTTTTGATGTGCATTCATTTTCTACAACAGCGACGACCTGCTATCCTTCCATGTTTACAGGGGATGGATCCAACATACTCTGTGACTGTGGACAATGTTGATTGTGCATTCTTTGACAAAGTTGAAAAACTTGGTCATTTTGGACGACATAACAAGGAAACCATTGCTCATCTTGTGTGGGGATTTTTCTATTATTGGGCATATTGTCATGATTATGCAAATTCCGTTATATCTGTACGCACAGGAAGCACAATCAGCAAGCGAGATAAGGATTGGACAAGAAGAGTTGGTAATGATCGCCATCTGATATGTATAGAGGATCCTTTTGAAATATCTCATGATCTGGGTCGAGTGGTAGATAAACACAGCATCAAAGTTCTCAGAGAAGAGTTTGAACGTGCTGCTGATATTATGCAGTATGATCCAAATCCATGTGTTAAACTTTTTGAGCCTTATGTTCGTAGCAGTTGA 2028 0.4009 MNGGGGNFPPSQSNGGDFLLSLLQKPRPPQPSSTPPQQSVTIDPAVAMMGPTIPFSTSQYQSNGHDHLNLHPLHHHLHQNQNLPPWSHTPSSSYPQNSFGLLHNPFSLPRVPETHFNTTTNTTTPLHFSNGLSLADDLRRLGFPIETNNNNSFIHHHQQQQQQQQQHELKLQFGSLPTVSYANTSSEVSSNGSFNGFDRNGVIGNFRSTEQIRVPPGFGNNVRGTGYGGTEVGDGELYSKRENVRLGFGERSDIRNNVGHELRLPDQLDNPGPPSGSELHSDYVDVDAIGEQIADSLLLEEELDDKSTNATKRHGPKEKDARFSDSRGKQLLSQRARTFKRQMMCRRDIDSLSVPFLSIFESLIPPEEEKLKQKQLLGLLEKLVCKEWPMARLYLYGSCANSFGVSKSDIDVCLAIQEADMDKSKIIMKLADILQSDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYANIDSRLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCIHFLQQRRPAILPCLQGMDPTYSVTVDNVDCAFFDKVEKLGHFGRHNKETIAHLVWGFFYYWAYCHDYANSVISVRTGSTISKRDKDWTRRVGNDRHLICIEDPFEISHDLGRVVDKHSIKVLREEFERAADIMQYDPNPCVKLFEPYVRSS 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01232 675 MobiDBLite consensus disorder prediction 1 40 - -
Tsu08g01232 675 Pfam Cid1 family poly A polymerase 574 632 IPR002058 -
Tsu08g01232 675 PANTHER UTP:RNA URIDYLYLTRANSFERASE 1 272 673 - -
Tsu08g01232 675 MobiDBLite consensus disorder prediction 1 19 - -
Tsu08g01232 675 CDD NT_PAP_TUTase 381 484 - -
Tsu08g01232 675 Gene3D - 487 655 - -
Tsu08g01232 675 PANTHER POLY A POLYMERASE CID PAP -RELATED 272 673 - -
Tsu08g01232 675 MobiDBLite consensus disorder prediction 258 281 - -
Tsu08g01232 675 SUPERFAMILY PAP/OAS1 substrate-binding domain 489 658 - -
Tsu08g01232 675 SUPERFAMILY Nucleotidyltransferase 349 485 IPR043519 -
Tsu08g01232 675 Gene3D Beta Polymerase, domain 2 373 486 IPR043519 -
Tsu08g01232 675 MobiDBLite consensus disorder prediction 300 328 - -
Tsu08g01232 675 MobiDBLite consensus disorder prediction 300 326 - -
Tsu08g01232 675 Pfam TUTase nucleotidyltransferase domain 368 466 IPR045100 GO:0016779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01232 - - cam:101492938 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01232 08 13719546 13725749 Tsu08g01232 08 13719546 13725749 ECH