Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01231 AtggcaaatcaaaacaataatCTCCCAAAAGTCTTTCTTCATGGTCCTCCCAAATTCTCCATACTTCTCCAACCAAAACCTTCACACAACTTCCATATCCTAAACCCTTCTTCTCTCCCCCCTCTCCACGAATTCATAGCTCTTAATCCTCACCATGCCACCTCCATCACCGCCATTGTCTGTACCGCCGGCTGCCCCGTTGATGCCGAAGTCCTCCAACTTCTCCCCTCCCTCCGTCTAGTCTGCACCCCCAGTGCCGGAACTAATCACATTGATCTCTTTGAGTGTCGTCGTCGGGGTATCCAGGTTTCCAGTGCCGGAAATATTTTCTCTGAGGATGTTGCTGATCTGGCTGTGGCTTTGCTGATTGATGTTGGCAGGAAAATTTCAGCGGCAGATCGGTTCTTGAGAAGTCAGCTTCAGAATCAGAATAAGCCTTGGGATTTTCCACTTGGTTCTAAGTTAACAGGAAAAAAGATTGGAATTGTTGGAATGGGAAGAATTGGCTTAGAAGTTGCAAAGAGGCTTGAAGCATTCAATTGCATGATATCATACAACTCTAGGAACAAAAAACCATTACTTTCATACCCTTTCTATTCAACTGTCATAGAACTTGCCACTAGCACCAATGTACTTATTCTCTGTTGTGAACTAAATGACCAAACAAGGCACATTGTGAACAAAGAAGTCATGTTGGCATTAGGAAAAGGAGGAATTATAGTGAATGTTGGAAGAGGTGCTCTCATTGATGAAAAGGAATTGTTGAGATGTTTGATTGAAGGTGAAATTGAAGGTGCTGGTTTGGATGTGTTTGAAAATGAACCATATGTTCctaaagaatttttttcattGGATAAAGTTGTTTTGTCACCACATGCAGCAGTCTTAACTTCAGATTCTTTTATGAGTATTTGCCAACTTGTGGAACAGAATTTGGAAGCTTTCTTTTCAAATAAGCCTCTGATTACTCCAGTTATatag 981 0.4057 MANQNNNLPKVFLHGPPKFSILLQPKPSHNFHILNPSSLPPLHEFIALNPHHATSITAIVCTAGCPVDAEVLQLLPSLRLVCTPSAGTNHIDLFECRRRGIQVSSAGNIFSEDVADLAVALLIDVGRKISAADRFLRSQLQNQNKPWDFPLGSKLTGKKIGIVGMGRIGLEVAKRLEAFNCMISYNSRNKKPLLSYPFYSTVIELATSTNVLILCCELNDQTRHIVNKEVMLALGKGGIIVNVGRGALIDEKELLRCLIEGEIEGAGLDVFENEPYVPKEFFSLDKVVLSPHAAVLTSDSFMSICQLVEQNLEAFFSNKPLITPVI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01231 326 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 120 294 IPR006140 GO:0051287
Tsu08g01231 326 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 51 139 - -
Tsu08g01231 326 CDD HPPR 9 317 - -
Tsu08g01231 326 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 55 325 IPR006139 GO:0016616|GO:0051287
Tsu08g01231 326 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 3 325 - -
Tsu08g01231 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 111 294 IPR036291 -
Tsu08g01231 326 Gene3D - 111 297 - -
Tsu08g01231 326 Gene3D - 51 320 - -
Tsu08g01231 326 PANTHER GLYOXYLATE/HYDROXYPYRUVATE REDUCTASE HPR3 3 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01231 Tsu-Chr8 13706318 13717516 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01231 - K15919 gmx:100777313 438.728