Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01224 ATGGGTTCCGAAGCTGATGACACAAAAACCGATACACCAACACAAACACTTCAACTCCAATCCAATAACCAACTTCAAACTCATTTTGTTTTACCCGAAAATCACGCTAACAGCCAAGAAACCGTTACTAACAATAACCAAATTACTAGTTCTCACCATGGAGGTGCAGATAGGAAAAACGATGGCACCATAGGGTTTATGTTTCCTCATTCACTTCTCCCTGTTCCAGTTCCGCCGGAGATTTATCAAAGCAACAAAAATAACGAATCTCCGACTAGTCTCTCCGTCGCCGAAACCATGCCGGATTTCGGTACTTTTATCCGTCAGCGTAGCACCGATTTATCAGCGGCAATTGCGAAACGAGTTTCATCTTTTCGTCAATCGATGGAGGACAATTTGAATTCGAATTTGAAATCGAACGAGATTGAGAGTAATGATCGGTATCAGGAAGTGACGGAGTATAATCTTTCAGGACTAAAGGTTTTTGTGAAGGTGAAACCGGAAGAAGAATCTGAGATGAAAGGAAGAATCACGTTCTTCTCGAGATCAGGTTGCAGAGATTGTACAGCGGTGAGAAGATTCTTCAGAGAGAAAGAGATTAAGTTCGTTGAAATCAACGTTGATGTGTTTCGTGAGAGGGAGAAAGAGTTACGAGAACGAACGGGAAATGTTTCGGTGCCGATGATTTTCTTCAACGAGAAGCTTATCGGGGGATTGGTGGCGTTGAATTCGCTGAGAAATAGTGGTGAATTTGAAGGGAGGTTGACGGAGATGGTGGTTGAGAAATTTCCCGGCGATGATACGCCGTTACCGCCGGTGTACGGTTATGATTATGTTGAAGATGATCGGACGGATGAGATGGTTGGAGTTGTTAGGATTTTGCGGGAGAAGTTGTTGATTCAAGATCGGTTGCGGAGAATGAAAATTGTTAAGAATTGTTTTGAAGGGAACGAGTTTGTGGAGGTTGTTGTTCAACACTTCAAGTGCGCGCGTAATGAGGCTGTTGATATCGGAAAAGAGTTGTCCAGAAAGCACTTCATCCATCATGTTTTTGGGGAAAATGATTTTGAAGAGGGAAACCACTTTTATCGTTTCCTCGAGCATGAACCGTTTATCCCCAAATGCTTTAATTTCCATGGTGCCTTAAATGACAAGGAACCAAAGACAGCAGCTTCAATTTGTGAAAGGCTTACCAAGATTATGTCTGCCATTCTCGAGTCTTATGCTTCTGATGATAGGCAACATGTTGATTATGAAGCCATTAGCAAAAGTGAAGAATTTCGTAGGTATCTAAACATGACTCAGGATCTGCAGCGAGTAAATATCTGCAAACTATCAGAAAATGAGAAGCTTGCATTCTTCTTAAATTTGTATAATGCCATGGTCATCCATGCTGTAATTAGCGTAGGGAGTCCAGAAGGCGTTATCGATAGGAGATCATTCTTCAATGATTTTCTGTATTTGATTGGAGGACATCCTTATTCACTAGCCATTATTGAAAATGGTATTCTCAGATGTAATCAGAGGTCACCATATTCCTTAATGAAGCCCTTTAGCACCGGAGATAAGCGTTTAGAGGTAGCTCTTGTCAAGTTGAACCCATTATTTCACTTTGGACTTTGTAATGGTACAAAATCTAGCCCAAATGTGAGGTTCTTTTCACCTAATAGAGTTGTAGATGAATTAAGAGGTGCTGCAAGAGAGTTCTTTGAAAATGATGGAATTGAAGTGGACCTAGAGAAGCGAACGGTTCATCTCACGCGGATTTTCAAGTGGTTCGGTGGCGATTTTGGACAAGATAAAGAAATGCTACTTAAGTGGATACTAAATTACTTGAATCCAAATAAAGCAGGTCTTGTGACACATCTTTTGAGTGATAATGGACCTGTTAATATATCTTACCagaattttgattggtcaaCAAATTGTTGA 1932 0.4053 MGSEADDTKTDTPTQTLQLQSNNQLQTHFVLPENHANSQETVTNNNQITSSHHGGADRKNDGTIGFMFPHSLLPVPVPPEIYQSNKNNESPTSLSVAETMPDFGTFIRQRSTDLSAAIAKRVSSFRQSMEDNLNSNLKSNEIESNDRYQEVTEYNLSGLKVFVKVKPEEESEMKGRITFFSRSGCRDCTAVRRFFREKEIKFVEINVDVFREREKELRERTGNVSVPMIFFNEKLIGGLVALNSLRNSGEFEGRLTEMVVEKFPGDDTPLPPVYGYDYVEDDRTDEMVGVVRILREKLLIQDRLRRMKIVKNCFEGNEFVEVVVQHFKCARNEAVDIGKELSRKHFIHHVFGENDFEEGNHFYRFLEHEPFIPKCFNFHGALNDKEPKTAASICERLTKIMSAILESYASDDRQHVDYEAISKSEEFRRYLNMTQDLQRVNICKLSENEKLAFFLNLYNAMVIHAVISVGSPEGVIDRRSFFNDFLYLIGGHPYSLAIIENGILRCNQRSPYSLMKPFSTGDKRLEVALVKLNPLFHFGLCNGTKSSPNVRFFSPNRVVDELRGAAREFFENDGIEVDLEKRTVHLTRIFKWFGGDFGQDKEMLLKWILNYLNPNKAGLVTHLLSDNGPVNISYQNFDWSTNC 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01224 643 ProSiteProfiles DEP domain profile. 294 367 IPR000591 GO:0035556
Tsu08g01224 643 ProSiteProfiles Glutaredoxin domain profile. 165 262 - -
Tsu08g01224 643 Pfam Protein of unknown function, DUF547 444 569 IPR006869 -
Tsu08g01224 643 Pfam Glutaredoxin 177 236 IPR002109 -
Tsu08g01224 643 Gene3D Glutaredoxin 172 259 - -
Tsu08g01224 643 SUPERFAMILY "Winged helix" DNA-binding domain 285 383 IPR036390 -
Tsu08g01224 643 Coils Coil 200 220 - -
Tsu08g01224 643 CDD DEP 286 364 - -
Tsu08g01224 643 SMART DEP_3 294 367 IPR000591 GO:0035556
Tsu08g01224 643 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 22 643 - -
Tsu08g01224 643 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 299 365 IPR000591 GO:0035556
Tsu08g01224 643 Gene3D - 283 424 IPR036388 -
Tsu08g01224 643 PANTHER F26K24.21 PROTEIN 22 643 - -
Tsu08g01224 643 SUPERFAMILY Thioredoxin-like 174 257 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01224 Tsu-Chr8 13571573 13580829 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01224 - - gmx:100810111 915.22