Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01204 ATGGAGGCTTATAAAAGATGGGTCAGACAGAACAAAGAATATGTGCACTCTTTAGAATCTCTAGCCAATGGATTGACATGGCTTCTTCCTGAACGGTTTTCTGATTCAGAGATTGGACCAGAAGCAGTGACAACAATTTTGGGAATCATCACAGCTATCAATGAACATGTAATTGATACTGCGCCTAACCAAAATATTACAGGCTCTGTAGAGCCTAATTCATTTCCTTATCCATTATGCTTATCCGCAATAAAGGATGTGGAAACATTAGTTGAAGTTGTGGCACAACATTACTATGGTGATGATAAGAAATGGAATTTCCTTGCTGTTACCGAAGCAACCAAGGTACTGGTTCGATTATCTTTGTTTCGAAAGAGTGGATATAAAATGTTGTTACATGGAGGGGAGACATCTAATGATGCGATGCATTCAAATGATTCTTCTACTTCACAGCATCAAATAGCCGTAAACCCGAAAGGACGTTATAATCCTGGAACAAACCCGTGGAATATGGAAGGAATGGCACTGTCTGCTTTAAATCAATTTGGAGAAAAAGCACGGATGGTGTCAGAACCGGTGTGGTTACGTAGGGTACATCACCAACAAGCAATCATGGAGCCCACTGTTTCAAGGGTAGTGAAACCTACACTTTCCACCATATTGTCGAAAAAGGGTCTTCGTGGAGCTTTGTTTTTGCTTGGAGAAGTTCTATTCATTACTAGACcacttatttatgttttattcatTCGAAAATACGGTATTCGATCATGGACACCTTGGTTCCTTTCACTGGCTATGGATAGCATATCAAACAGTATTCTCTCACTTATTACAACAACAGTGGCCAGTGAAAATCAGAAAATGATTCATATTTCTGCCCCAGAAAAGGATGAGGTTAAACGACGGAAGCTGTTATTCGTACTTTACCTAATGAGAGATCCATTTTTCAGCAAATATACAAGGCGAAAACTCGAAAGCACGGAGAAAGTAATGGAAACTATACCTGTCATAGGATTTCTTACAGCGAAAATTGTCGAACTTACGATTGGAGCTCAAACACGATACACTTACATGTCAGGATCATGA 1086 0.3904 MEAYKRWVRQNKEYVHSLESLANGLTWLLPERFSDSEIGPEAVTTILGIITAINEHVIDTAPNQNITGSVEPNSFPYPLCLSAIKDVETLVEVVAQHYYGDDKKWNFLAVTEATKVLVRLSLFRKSGYKMLLHGGETSNDAMHSNDSSTSQHQIAVNPKGRYNPGTNPWNMEGMALSALNQFGEKARMVSEPVWLRRVHHQQAIMEPTVSRVVKPTLSTILSKKGLRGALFLLGEVLFITRPLIYVLFIRKYGIRSWTPWFLSLAMDSISNSILSLITTTVASENQKMIHISAPEKDEVKRRKLLFVLYLMRDPFFSKYTRRKLESTEKVMETIPVIGFLTAKIVELTIGAQTRYTYMSGS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01204 361 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX16 1 361 - -
Tsu08g01204 361 Pfam Peroxisomal membrane protein (Pex16) 2 351 IPR013919 -
Tsu08g01204 361 PANTHER UNCHARACTERIZED 1 361 IPR013919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01204 Tsu-Chr8 13326904 13331044 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01204 K13335 - gmx:100793724 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01204 08 13326904 13331044 Tsu08g01204 08 13326904 13331044 ECH