Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01201 ATGGCAGAAACAGATCAACTTCCAGAAGGAACATTACAGAATGTTCTAGACCAAGATTCTCTCAAGTGGGTTTTCGTTGGTGGTAAAGGTGGTGTTGGTAAAACAACATGCAGTTCTATTCTCTCTATTCTTCTCGCTTCTGTTCGTTCTTCTGTTCTCATTATCTCAACCGACCCTGCTCATAATCTCAGCGATGCTTTTCAACAACGCTTCACAAAAGTTCCTACTTTGGTTAATGGTTTCTGCAATCTTTATGCCATGGAGGTGGATCCTGCTGTTGAGCATGAGGATATGGGTGGTAATGATGGGATGGATAATTTGTTCAATGAGCTAGCTGGTGCAATTCCTGGAATTGATGAAGCTATGAGCTTTGCTGAGATGTTGAAattGGTGCAGACAATGGATTATTCTGTTATTGTATTCGATACTGCTCCCACCGGCCATACACTTAGACTGTTGCAATTCCCGTCAGTTTTAGAGAAGGGTCTTGCAAAAGTGATgtctttgaaaaataaatttggggGTTTGTTTAGTCAGATGACTCGCATGTTTGGCATgggtgatgattttggtgaagATGCAATCCTTGGGAAGCTTGAAGGAATGAAGGATGTAATTGAACAAGTTAATAGGCAATTCAAAGATCCAGACATGACAACCTTTGTCTGTGTTTGCATTCCCGAATTCCTCTCGCTTTATGAAACAGAAAGACTAGTTCAAGAACTCACAAAGTTTGAGATTGACACACACAATATCATCATTAATCAAGTCATCTTCGACGATGAAGATGTTGAATCCAAGTTACTTAAAGCAAGAATGAAAATGCAACAGAAGTATTTGGACCAGTTTTACATGTTGTATGACGACTTCAACATAACTAAGCTGCCACTTCTTCCACAAGAGGTTACTGGTGTTGAAGCTCTAAGATCATTTTCAAGACATTTTTTGACACCATATCAATCGATATGCAGTAGTGATCAAGTAGAGAGGTTAGAGAATAGAATAACAGCGCTACAATGCCAGTTAAAAGAGGCTGAAGAAGAATTGGAGAAAGTCAAAAGGGGGAAGCAAAAGGCTTGA 1080 0.3815 MAETDQLPEGTLQNVLDQDSLKWVFVGGKGGVGKTTCSSILSILLASVRSSVLIISTDPAHNLSDAFQQRFTKVPTLVNGFCNLYAMEVDPAVEHEDMGGNDGMDNLFNELAGAIPGIDEAMSFAEMLKLVQTMDYSVIVFDTAPTGHTLRLLQFPSVLEKGLAKVMSLKNKFGGLFSQMTRMFGMGDDFGEDAILGKLEGMKDVIEQVNRQFKDPDMTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVIFDDEDVESKLLKARMKMQQKYLDQFYMLYDDFNITKLPLLPQEVTGVEALRSFSRHFLTPYQSICSSDQVERLENRITALQCQLKEAEEELEKVKRGKQKA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01201 359 Pfam Anion-transporting ATPase 22 314 IPR025723 -
Tsu08g01201 359 CDD ArsA 37 312 - -
Tsu08g01201 359 Hamap ATPase <gene_name> [GET3]. 8 323 IPR027542 GO:0005524|GO:0016887
Tsu08g01201 359 PANTHER ATPASE LOC107826790 5 358 - -
Tsu08g01201 359 Gene3D - 1 349 IPR027417 -
Tsu08g01201 359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 311 IPR027417 -
Tsu08g01201 359 TIGRFAM GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 25 313 IPR016300 GO:0005524|GO:0016887
Tsu08g01201 359 PANTHER ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE 5 358 IPR016300 GO:0005524|GO:0016887
Tsu08g01201 359 Coils Coil 328 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01201 Tsu-Chr8 13308333 13312700 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01201 K01551 - gmx:100816517 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01201 08 13308333 13312700 Tsu08g01201 08 13308333 13312700 ECH