Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01159 ATGGTTGTAGCATCACGTACATTAGAAATCACAGTTATATCGGGTGAAAACATTCAAGCAACTGAGGATGCATATGTTGTCGTTCGGGGTGAGTCTCTAAATTGTCACACGACAAAAACGGTGAAAAATAACGGGTGTGGGAAAAATTCGAGTTTTCTTTCATGGAATGAGAAATTTTTGTTGGACATGCCGATGCATGCAAGGTCAATCTCATTTGAGGTGCAATGCAAGAAGTTTAAAGGTATTCGTCCTATTGGGGTGGCAAGAATTGCCATTTCTGATTTGCTGGGAGATTGTTCGCAAATTTTTAGTTATAGATTGAGGGATTGGGAAGGGAGGCAAAATGGAGTTATTCATTTCAGTGTGAGGGTGGTTGTTCCAGAGAAAATATTGGTTTCTATGACGGAAAAGAAAACGGCGGCGATTGAAAAGAATTATGGTAATCGTCTCACCGGAATGGATGTTGGTGCCAAGAAATCTAATAATGGTGTTGTTATTGGTATTCCAGTATGGTGGAATTACCCTAACAttatttaa 537 0.3929 MVVASRTLEITVISGENIQATEDAYVVVRGESLNCHTTKTVKNNGCGKNSSFLSWNEKFLLDMPMHARSISFEVQCKKFKGIRPIGVARIAISDLLGDCSQIFSYRLRDWEGRQNGVIHFSVRVVVPEKILVSMTEKKTAAIEKNYGNRLTGMDVGAKKSNNGVVIGIPVWWNYPNII 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01159 178 PANTHER INGRESSION PROTEIN FIC1 5 175 - -
Tsu08g01159 178 Pfam C2 domain 7 96 IPR000008 -
Tsu08g01159 178 Gene3D C2 domain 3 147 IPR035892 -
Tsu08g01159 178 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Tsu08g01159 178 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 124 IPR035892 -
Tsu08g01159 178 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 5 175 - -
Tsu08g01159 178 SMART C2_3c 7 104 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01159 Tsu-Chr8 12795012 12795793 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01159 - - mtr:MTR_3g064780 268.47