Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu08g01158 | ATGGAAGGAAACAAACAAGCATGCACCTTAGAAATCACCATTATCTCCGGACAAAACATAAGCATCGAGCGAAATTCAAAGGCAGAAgatatatatgttgttgttcGTGCGGAGTCTCTCAACTCTTGCACGACAAAAATGGTGAATGAAAATGAGGGTATACTTTCATGGGACGAGAAATTCATGTTAGATATTCCTTCACATGCAAGGTCAGTGACGTTTGAGGTACAATGCAAGAAATACAAAGGAGTTCGTCCCATTGGAGTTGCTCGGATAGCACTTTCGGATTTTCTCGGTGACAATATGTTGTTACAAAGTTGTGTTCAAAATTTTAGTTATGGAGTGAGGGATTGGGATGGTAGGAAAAATGGTGTTATTAATTTTTCTGTGAGGGGGGTGACACAAGAAGGTAATTTGTGTTTTGATTCTTTGGAAAAAGAACAAGATATGGGAAAAAAGAAGGTGAGTTCTAATGAATTTGAGGATGCTAGGTctaaggataaaaaaaattcaagacaTGTTGCCATTGGGATTTCACTGTTGGGTGTCTTGTTTTTCTTAGGGCATTCTCTTTTGTCTTTTGTACGTAGAAAGAAATGA | 600 | 0.36 | MEGNKQACTLEITIISGQNISIERNSKAEDIYVVVRAESLNSCTTKMVNENEGILSWDEKFMLDIPSHARSVTFEVQCKKYKGVRPIGVARIALSDFLGDNMLLQSCVQNFSYGVRDWDGRKNGVINFSVRGVTQEGNLCFDSLEKEQDMGKKKVSSNEFEDARSKDKKNSRHVAIGISLLGVLFFLGHSLLSFVRRKK | 199 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu08g01158 | 199 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 9 | 134 | IPR035892 | - | |
| Tsu08g01158 | 199 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
| Tsu08g01158 | 199 | Gene3D | C2 domain | 7 | 132 | IPR035892 | - | |
| Tsu08g01158 | 199 | PANTHER | C2 DOMAIN PROTEIN | 6 | 198 | - | - | |
| Tsu08g01158 | 199 | PANTHER | INGRESSION PROTEIN FIC1 | 6 | 198 | - | - | |
| Tsu08g01158 | 199 | SMART | C2_3c | 9 | 106 | IPR000008 | - | |
| Tsu08g01158 | 199 | Pfam | C2 domain | 9 | 98 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu08g01158 | Tsu-Chr8 | 12791522 | 12792207 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu08g01158 | - | - | gmx:100802552 | 190.66 |