Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01137 ATGGGAGAACCAAGAGAAAGGTATGCAGTGGTGACAGGGGCAAACAAAGGAATTGGATTTGAGATAGTAAAGCAGTTAGCTTCAGCTGGAATCAAAGTGGTGCTTACAGCAAGAGATGAGaaaagaggtcttcaagctTTGGAAACACTCAAAGCTTCTGGTTTATCTGATTTTGTTGTCTTTCATCAACTTGATGTGGCTGATGCTTCAAGTGTAGCCTCTCTTGCAGATTTTGTCAAATCCCAATTTGGCAAACTAGATATTCTGGTTAACAATGCTGCAATCAGCGGAGTTGAAATTAAAGACAGagatttattcaatttaataatCCTTACCAATGGGGCAGTATCTGATGATGAGTTGAGAAGGGCAACAACAGAAACATACGAGTTAGCGAAAGAATGCATACAAATAAATTACTATGGTGCTAAAACAACATTTGAATATCTTCTTCCCCTACTCCAATTATCTGATTCACCAAGAGTTGTTAATGTTTCATCATATTTGGGTGAGATAGAGCGTGTATCAAATGAATGGGCTAAAAGAGTCTTTCGTGATGTTGATAACCTTACGGAAGAGAGAATAGATGAAGTGTTAAAGGAGTTTATCAAAGATTATGAAGAAGGATTCTTAGTAAGAAAATGTTGGCCTAGATATTTTGGTGCCTATACTGTTGCTAAAGCTTCTTTGAGTGCCTATACAAGAATTATTGCAAAGAAATATCCTACCTTTTGCATCAATTGTGTTTGTCCTGGTTATGTCAAGACAAATATGACTGCTAATACAGGTATCTTAAGAGCAGAAGAAGGTGCTGCTAATCCAGTTAGGCTAGCATTACTTCCCAATGGTAGTCCATCTGGCCTTTTCTATAACCAGAATGAAGTCTCTTCCTTTTGA 897 0.3645 MGEPRERYAVVTGANKGIGFEIVKQLASAGIKVVLTARDEKRGLQALETLKASGLSDFVVFHQLDVADASSVASLADFVKSQFGKLDILVNNAAISGVEIKDRDLFNLIILTNGAVSDDELRRATTETYELAKECIQINYYGAKTTFEYLLPLLQLSDSPRVVNVSSYLGEIERVSNEWAKRVFRDVDNLTEERIDEVLKEFIKDYEEGFLVRKCWPRYFGAYTVAKASLSAYTRIIAKKYPTFCINCVCPGYVKTNMTANTGILRAEEGAANPVRLALLPNGSPSGLFYNQNEVSSF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01137 298 Pfam Enoyl-(Acyl carrier protein) reductase 214 262 - -
Tsu08g01137 298 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 298 - -
Tsu08g01137 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Tsu08g01137 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 IPR002347 -
Tsu08g01137 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 223 242 IPR002347 -
Tsu08g01137 298 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Tsu08g01137 298 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Tsu08g01137 298 PRINTS Glucose/ribitol dehydrogenase family signature 154 170 IPR002347 -
Tsu08g01137 298 PRINTS Glucose/ribitol dehydrogenase family signature 223 242 IPR002347 -
Tsu08g01137 298 PRINTS Glucose/ribitol dehydrogenase family signature 242 259 IPR002347 -
Tsu08g01137 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 284 IPR036291 -
Tsu08g01137 298 Pfam short chain dehydrogenase 8 172 IPR002347 -
Tsu08g01137 298 Gene3D - 3 298 - -
Tsu08g01137 298 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 7 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01137 Tsu-Chr8 12528840 12532467 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01137 10 263 Acyl Lipid Metabolism Gene Families AT1G24360 21.790 4.19e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01137 K15095 - gmx:102663482 410.994