Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01088 atgtccAATTCATATGTTGATCTTCCTATTATAGATATTTCTGAACCATTACAATCATCTTCTTTAACAACTCTCTCTAAAGCTTGCAAAGATTGGGGATTTTTCCACATAATTAATCATGAAATATCAAAAGATCTTTGTAACCAACTTCATTCATTATCTAAATTAATCTTTAATCTTCCTTCTGATACTAAGCTTAAACTTGGTCCTTTTTCTTCTATAAAATCTTATACACCTCACTTCATTGCTTCTCCATTTTTTGAAAGCCTTAGAGTTGATGGACCTAACTTCTATGTATCTGCTAAGAGTTCTGAAgatgttttgtttgaaaaacaaaattctaaattcaGTGAGACACTAGAGGACTATTGTAGTAAGATGGCAGATTTATCTCAAAGAATTTTAAAGCTTGTGTTAATGAGCttaggagaaggatttgagaagCTATTTTATGATTCACAATTCAAAAAGTGTGAAGGTTACTTAAGAATAAACAACTATACATCACCAGAAATTATGGATTTAGAAGATCATGTTGAGGGACTTGGAATGCATACTGACATGAGTTGCATAACTATCTTATACCAAGATGAAATTGGAGGACTTCAAGTTAAAACACATGAAGGAAAATGGATTGATATAAGTCCTTCTGAAGGGTCCTTAGTGGTAAATATAGGTGATATGATGCAAGCTTGGAGTAATGATAAGTTAAGATCTTCTGAACATAGAGTTATTTTGAAGCAACCTGTTAATAGATTTTCTTTGgcttttttttggtgttttgagGATGAGAAAGTGATTATGGCACCTAATGAAGTTGTTGGAGATGGAAATAAGAGAGTTTATGATCCTTTTGTTTGCAAAGATTATGTCAAGTTTAGAGAGAATAATCAAAGAGGAAGATTTGAAAAAGTTGGTTATACTGTTAGAGATTTTGCTGGAATTAAGTCTCAACTGTAA 960 0.2906 MSNSYVDLPIIDISEPLQSSSLTTLSKACKDWGFFHIINHEISKDLCNQLHSLSKLIFNLPSDTKLKLGPFSSIKSYTPHFIASPFFESLRVDGPNFYVSAKSSEDVLFEKQNSKFSETLEDYCSKMADLSQRILKLVLMSLGEGFEKLFYDSQFKKCEGYLRINNYTSPEIMDLEDHVEGLGMHTDMSCITILYQDEIGGLQVKTHEGKWIDISPSEGSLVVNIGDMMQAWSNDKLRSSEHRVILKQPVNRFSLAFFWCFEDEKVIMAPNEVVGDGNKRVYDPFVCKDYVKFRENNQRGRFEKVGYTVRDFAGIKSQL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01088 319 Gene3D - 1 293 IPR027443 -
Tsu08g01088 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 157 262 IPR005123 -
Tsu08g01088 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 312 - -
Tsu08g01088 319 SUPERFAMILY Clavaminate synthase-like 4 297 - -
Tsu08g01088 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 76 IPR026992 -
Tsu08g01088 319 Pfam 2OG-Fe(II) oxygenase superfamily 163 258 IPR044861 -
Tsu08g01088 319 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 1 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01088 Tsu-Chr8 11896166 11898074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01088 6 290 Glycosyltransferase AT5G59530 27.852 1.61e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01088 - - gmx:100782766 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01088 08 11896166 11898074 Tsu08g01088 08 11896166 11898074 ECH