Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01076 ATGCAAAGGTATCATGCTGGCAGCTGCTCTAGTGCAGTGAATAACAGTGCCATAGGTGGACCATCTTCTAGGGACACCGGGAGATCTGATTCATCTTTTCCAGCTCACTTCCCTGTAAAATCAAGGCGACAACCACAGTTGAACTTAAACCCATACAAATTGAAGTGTGATAAAGAAGCTTTGAACGCTAGGCTTGGGCCTCCAGATTTTCTTCCCCAAACTCCAAATTGCCCTGAGGAGACTCTGACCAGAGAATATTTGCAATCTGGTTATAGGGATACAGTTGAGGGACTTGAGGAAGCTAGAGAAATTTCGCTGACCCAGGTTCCACATTTTAACAAGACAATCGTTCTTAATTGCAGAGAGGCAATTAAAAAACGTCTTAGGGCCATCAATGAATCTCGCGCACATAAAAGGAAGGCTGGTCAAGTATATGGTGTGCCTCTTTCGGGATTACAACTTGCCAAACCTGGTGTTTTCCCTGAACTAAGGCCATGTGGCGAGGACTTCCGGAAGAAATGGATTGAGGGCCTATCTCAACCCCACAAGCGGTTACGCACTTTGACTGACCATGTTCCTCATGGTTATAAAAGGTCATCACTATTGGAGGTTCTTATCAGGAATAATGTTCCATTGCTAAGGGCCACCTGGTTTGTAAAGGTTACTTACCTCAATCAGGTTCGGCCAGGTTCTGCTGCCATTTCTTCTGGGACTGCTGACAAAGTTCAGCTGTCTCGTACAGAGATTTGGACTAAAGATGTTATCCATTACTTGCAAACTCTTTTCGAtgaatttttctcaaaaaatactTCTCATTCTACTCTTCATAATCGAGAGCGGTCACCACAAATGCCTTATACTGGAACACTGCTGCACAAAAGTGATCCGTTATCATCTGTTTCTGGCGGTGAAGAGCCATCCTTACATTTTAGATGGCGGTATATTACCCGACTTTTGCAATGGCATCACGCCGAAGGGCTCATTCTTCCTTCTCTTGTCATTGACTGGGTTTTGAATCAACTGCAGGAAAAAGATCTGCTTGAGGTTTGGCAGCTGTTATTGCCTATAATATATGGCTTCTTAGAAATTGTTGTCCTATCTCAAACCTATGTACGCGCTCTTGCTGGGTTAACTCTTCGTGTCATTCGTGATCCTGCTCCAGGTGGATCAGATCTAGTAGATAATTCCAGAAGGGCATATACAACATATGCTCTGATTGAGATGCTGCAATATTTAATACTTGCAGTGCCAGATACTTTTGTCGCATTGGATTGCTTTCCTTTACCATCCTCTGTAGTCTCGCATACAATGAACGATGGCAGTTTTGTATTAAAATCAACTGAAGCTGTAGGGAAGATAAAGAATAGTTCAGATGATTTTGGTCGCATTGTTTCATGTATTCAGAAACGTGGGGAAGATCTTGCCAAGTCTTCAAGCCCTGGCAATCCAGGTCATTGTCTAGCTAAGGTTGCGAAAGCCTTGGATAAATCTCTAATGCTTGGTGATTTACGTGAAGCATACAActttctttttgaagatttttgtgATGGAACTGTATCTGAAGGTTGGATTGCAAAAGTGAGTCCTTGCTTAAGGTTGTCGCTGAAATGGTTTGGGACAGTAAATATGTCACTTATACATTCAGTGTTTTTCCTCTGCGAGTGGGCAACATGTGATTTTAGGGATTTTTGTACTACCCCTCCTTGTGACATAAAGTTTACAGGTAGGAAAGATCTTTCCCAAGTGCACATAGCTGTTAGACTTTTGAAGATGAAATTGAGGGATGTGAAAACTTCATCAAGACGAACTAATCGAAGCATTCACAGAGCTAGTCAAAGGCATAATCAAAACTACACGACTACTGGTTCTTCAGTTATATCTGAAAGCCCTGGTCCTCTACATGATATTATAGTCTGTTGGATTGACCAGCATGTGGTGCATAAAGGGGAAGGTCTCAAGCGCCTACATTTATTTATAGTTGAACTAATACATGCAGGCATCTTTTACCCCTTGGCATATGTACGCCAGTTGATAGTGAGTGGGATCATGGATATGGATGCGAATGTGGTTGACCTGGAGCGGCAAAAGAGACACTCTCACATCTTAAAGCAGCTGCCTGGGCACTTTATGCGTGATGCTTTGGCAGAAACTGGGATTGCTGACGGGCCGCTGCTCGATGAGGCCTTGCAAATTTACTTGACTGAACGTCGCCTCATACTTCGTTCTTCTCCAAGTGAGCTCCATGATGGTGCCAATAGTGCCAAAGTATCTACTTTGAAACGAAAACGATATCCAGCTTCTTCAAAGAACGGGACTTCTGTTGTGTTAACTGATCCATGGAAAACTGCTCAAACCACAGTGTCTTCTAAAAGTTCAAAGGATGGTGCTAGTATTGAAGAAGTTAAAGAAACCATCTCTCTACTGTTACAACTACCAAGTAGTTTATCTAATTTGAACTCTACAGGATGTGTTGAATCTGAAGGCAGTGTTAGAAGACCTACCTGGCCTAATTACGGCAAGATTGAACCAGTGGAGGGCACACCGGGTTGTGAAGAATGTAGAAGAGCAAAGAGACAAAAGTTAAGTGAGGAAAGAAGCTCATTTGTTCCAGGTGATGATGATACATGGTGGGTGAAGAAGGGGTCAAAACCCTCAGAACCTCTCAAAGTTGACCAGCCACAGAAGACAACCAAGCAGGTTACCAAGAGTCGTCAGAAGAATGTGCGTAAAATGAGTCTCGCTCAATTGGCAGCTTCTAGAATTGAGGGCAGCCAAGGGCCATCAACTAGTCATGTGTGTGATAATAAGGTAAGCTGCCCTCACCATAGAACTCCTATAGATGGAGATGCTCTAAGGTCTGTGGATAGCATACGAACAAGTAGCTCTAGGGATATTTTTTTCATTGGAAAAGCACTGAAGAGGCTTCGTTTTGTTGAGAAAAGAGTTGTAGCAGTTTGGCTGCTGACTGTTGTTAAGCAGGCGATTGAAGAGACTGAAAAAAATATTGGCAAAGCTGGACAATTTGGTGGGGCTTATTCTATGGAGGATGATGGAAACTCAATACGGTGGAAACTTGGCGAAGATGAACTTTCTGCAATACTTTATTTGATAGACATCTCTGATGATTTGGTATCAGCTGTCAAGTTTCTCCTCTGGTTGATGCCGAGGGTTCTCAGCAGCCCCAGCTCTACTATTCATAGTGGGAGGAATGTTTTGATGCTACCAAGAAATGTGGAAAACCAAGTTTGTGACGTGGGGGAGGCTTTTCTGCTATCATCACTGAAAAGGTATGAGAACATTCTTGTTGCAGCAGACCTTATTCCTGAAGCTTTGTCACTTGCAATGCACCGTACGGCCACTATCATTGCATCTAATGGAAGGGTGTCAAATTTAGGAGCCACAGCTTTTACTCggtatttattgaaaaagtacAGTAATGTTGCTAGTGTCATTGAGTGGGAGCAAACTTTTAAGTCTACATGTGATGCAAGACTCTCCGCCGAACTTGAGTCTGTCAGGTCAGTGGATGGAGAGTTAGGGCTGCCCTTTGGAGTTCCTGCAGGAGTTGAGGACCCTGATGAATTTTTCCGTCAGAAGATAAGTGGTAGCCGATTACCATCCAGAGTAGGCGCAGGCATGAGAGACATAGTGCAGCGTAATGTTGAAGAGGCTTTCCAATATCTTTTTGGAAAAGATAGGAAACTCTATGCTGCTGGTACCCCAAAAGGTCATGCTTTAGAAAAATGGGATAATGGATATCAAATTGCTCAACAAATAGTTATGAGTTTGATCGACAGCATAAGACAGACTGGTGGTGCTGCTCAAGAAGGGGATCCCTCTTTGGTCTTGTCTGCGGTTTCTGCAATTGTTGGCAGTGTGGGTCCAACTTTAGCCAAAATGCCTGATTTTTCATCTGGCAATAATCAGTCAAGTATAGTGTCATTGAACTATGCCAGATGTATTCTGCGAATGCATATAACCTGTCTGCGCCTGCTTAAGGAAGCCCTGGGGGAACGTCAAAGCCGTGTGTTTGATATTGCTCTTGCAACTGAAGCTTCAAATGTTTTTGCTGGTGTTTTTGCTCCTAGTAAAGCATCTCGAGCTCAGTTTCAAATGTCTTCTTCTGAAGTCCATGATACTAGTGCCGCTGCTAATTCAAATGATGTGGGAAACAACTCTGTTAAAACTGTGGTTACAAAAGCAACAAAAATTGCTGCTGCTGTTTCTGCGCTTGTTGTTGGTGCAGTTATATATGGTGTTACCAGCCTGGAAAGAATGGTTACCATTCTCAGGTTAAAGGAGGGGCTAGATGTGATACATTGTATTAGAACCACAAGATCCAATTCAAATGGAAATGCCCGTTCAGTTGGGGCTTTTAAGGCAGATAATTCAATTGAAGTTCATGTCCACTGGTTTAGATTGCTTGTTGGAAACTGCAGAACCCTCTGTGATGGATTAGTGGTGAACCTATTGGGTGAACCATCTATTTCAGCTCTTTCAAGGATGCAACGTATGCTTCCTCTAAGTCTGATTTTTCCACCTGCCTATTCAATATTTGCATTTGTTAGATGGCGGCCATTCATTCTGAATGCTAATGTAGCAGTTCGTGAAGACATGAATCAACTTTATCAGTCTTTAACAATGGCCATAGCTGATGCTATAAAACATTTGCCTTTTCGTGATGTATGTTTTCGAGACTGTCAGGGGCTTTATGATCTTATGGCTGCAGATGGAAGTGATGCTGAATTTGCGGCCCTGCTAGAGTTGAATAGCTCTGATATGCATTTAAAATCCATGGCTTTTGTTCCTCTTCGTTCTAGGCTTTTTCTGAATGCCATGATTGATTGTAAGATGCCACCATCTATTTTGAACAAGGATGACGTGAGCCGTGTTTCCGGACCCAGTGAATCTAAAATTAAGTTTGCAAATGGTGATTCTAAGCTTCAGGATAAACTCGTGCATATTTTGGATACCTTGCAGCCTGCCAAATTTCACTGGCAGTGGGTTGCCCTCAGGCTGATTTTAAATGAACAAGCCCTCATCGAAAAACTGGAGGCACATGATGCGTCTTTATCCGATGCCATCCAATTGTCCTCACCTAGTCCGGAGAAGGCCGCTGCTGCTTCTGAGAATGAGAACAATTTCATTCAAATACTTCTCACTAGGTTACTGGGTAGACCTGATGCTGCACCTCTTTTTTCAGAGTTGGTTCATCTTTTTGGTAGGTCACTACAGGATTCAATGTTGTTGCAAGCTAAATGGTTCCTTGGAGGCCAAGATGTCCTCTTTGGTCGGAAGACCATTAGACAAAGACTACATAACATTGCTGAGAGTAAAGGACTTTCTGCTAAGATGCAGTATTCGGAGCCATGGGGTTGGTGTAGTCCTTGTACTGATCCAGTGACTATCAAAGGGGAAAAGAAGAAGTTTGATGCCACATCActtgaagaaggagaagttgttgATGAGGGGATAGATCTGAAAAGGAGCCTAAAAGGGCTCTCTCAAGTGTTTGACTCTGATAGCTCAAGAATAAACCAGCAACATGTGACTGAGAGAGCTCTTATTGATTTATCAGTTCtgtatattcaattttgcagAGAGCCATCTGTACGGAACATGAGACGTTTTCTGGCCCCTGTAATTCTTCGTCTCCTAGGCAGTCGGGTTGTGCATGAGGATGCATATATTGTGGCAAATTCCATGCATTCTAAGAAGGATTTAGAGTCACCTTCTGAAGCTGCTGCTGCTGCATTTGTAGACTTTTCTGCTGTGGGTCTATTTGATCGTTTGCTGTTGGTTTTACATGCGTTGTTGAGTAGTTATCCTCCAAGTTGGCTTAGGCCGAAACCTGGTTCAAAGTCTATCAATGAACCTACAAAGGAAGTTTCTGGATTTGACCGAGAATCATTGGAGAGTATGCAGAATGATTTAGACCGTATGCAACTGCCTGATACTATCCGGTGGCGTATCCAAGCTGCAATGCCGGTACTTTTTCCATCTACGTGGTGCTCTTTCTCCTGCCAGCCTCCACCTGTACCAACATCTGCTCTTGTTTCTCTTCAAGCTAGCAATACAACTCCTGGCTTTAACTTAAGTAGTTCAGCTACCTCCCATAGGAACCCGGTCTTATCAAGGGTTGCAGCTAACGCATCAGGGAAGTCAAAACAACAGGATAGTAGTGAATTGGAAATTGATCCCTGGACGCTTTTAGAAGATGGCGCTGGATCCTGCCCTTCTGCAAGTAATACTCCTAGCATAGGAGGTGGTGATGCTAATCTTCGAGCTGCGAGCTGGCTTAAAGGGGCTGTAAGGGTGAGAAGGACAGACCTCACATATGTTGGTCCTGTGGATGATGATAGttga 6366 0.427 MQRYHAGSCSSAVNNSAIGGPSSRDTGRSDSSFPAHFPVKSRRQPQLNLNPYKLKCDKEALNARLGPPDFLPQTPNCPEETLTREYLQSGYRDTVEGLEEAREISLTQVPHFNKTIVLNCREAIKKRLRAINESRAHKRKAGQVYGVPLSGLQLAKPGVFPELRPCGEDFRKKWIEGLSQPHKRLRTLTDHVPHGYKRSSLLEVLIRNNVPLLRATWFVKVTYLNQVRPGSAAISSGTADKVQLSRTEIWTKDVIHYLQTLFDEFFSKNTSHSTLHNRERSPQMPYTGTLLHKSDPLSSVSGGEEPSLHFRWRYITRLLQWHHAEGLILPSLVIDWVLNQLQEKDLLEVWQLLLPIIYGFLEIVVLSQTYVRALAGLTLRVIRDPAPGGSDLVDNSRRAYTTYALIEMLQYLILAVPDTFVALDCFPLPSSVVSHTMNDGSFVLKSTEAVGKIKNSSDDFGRIVSCIQKRGEDLAKSSSPGNPGHCLAKVAKALDKSLMLGDLREAYNFLFEDFCDGTVSEGWIAKVSPCLRLSLKWFGTVNMSLIHSVFFLCEWATCDFRDFCTTPPCDIKFTGRKDLSQVHIAVRLLKMKLRDVKTSSRRTNRSIHRASQRHNQNYTTTGSSVISESPGPLHDIIVCWIDQHVVHKGEGLKRLHLFIVELIHAGIFYPLAYVRQLIVSGIMDMDANVVDLERQKRHSHILKQLPGHFMRDALAETGIADGPLLDEALQIYLTERRLILRSSPSELHDGANSAKVSTLKRKRYPASSKNGTSVVLTDPWKTAQTTVSSKSSKDGASIEEVKETISLLLQLPSSLSNLNSTGCVESEGSVRRPTWPNYGKIEPVEGTPGCEECRRAKRQKLSEERSSFVPGDDDTWWVKKGSKPSEPLKVDQPQKTTKQVTKSRQKNVRKMSLAQLAASRIEGSQGPSTSHVCDNKVSCPHHRTPIDGDALRSVDSIRTSSSRDIFFIGKALKRLRFVEKRVVAVWLLTVVKQAIEETEKNIGKAGQFGGAYSMEDDGNSIRWKLGEDELSAILYLIDISDDLVSAVKFLLWLMPRVLSSPSSTIHSGRNVLMLPRNVENQVCDVGEAFLLSSLKRYENILVAADLIPEALSLAMHRTATIIASNGRVSNLGATAFTRYLLKKYSNVASVIEWEQTFKSTCDARLSAELESVRSVDGELGLPFGVPAGVEDPDEFFRQKISGSRLPSRVGAGMRDIVQRNVEEAFQYLFGKDRKLYAAGTPKGHALEKWDNGYQIAQQIVMSLIDSIRQTGGAAQEGDPSLVLSAVSAIVGSVGPTLAKMPDFSSGNNQSSIVSLNYARCILRMHITCLRLLKEALGERQSRVFDIALATEASNVFAGVFAPSKASRAQFQMSSSEVHDTSAAANSNDVGNNSVKTVVTKATKIAAAVSALVVGAVIYGVTSLERMVTILRLKEGLDVIHCIRTTRSNSNGNARSVGAFKADNSIEVHVHWFRLLVGNCRTLCDGLVVNLLGEPSISALSRMQRMLPLSLIFPPAYSIFAFVRWRPFILNANVAVREDMNQLYQSLTMAIADAIKHLPFRDVCFRDCQGLYDLMAADGSDAEFAALLELNSSDMHLKSMAFVPLRSRLFLNAMIDCKMPPSILNKDDVSRVSGPSESKIKFANGDSKLQDKLVHILDTLQPAKFHWQWVALRLILNEQALIEKLEAHDASLSDAIQLSSPSPEKAAAASENENNFIQILLTRLLGRPDAAPLFSELVHLFGRSLQDSMLLQAKWFLGGQDVLFGRKTIRQRLHNIAESKGLSAKMQYSEPWGWCSPCTDPVTIKGEKKKFDATSLEEGEVVDEGIDLKRSLKGLSQVFDSDSSRINQQHVTERALIDLSVLYIQFCREPSVRNMRRFLAPVILRLLGSRVVHEDAYIVANSMHSKKDLESPSEAAAAAFVDFSAVGLFDRLLLVLHALLSSYPPSWLRPKPGSKSINEPTKEVSGFDRESLESMQNDLDRMQLPDTIRWRIQAAMPVLFPSTWCSFSCQPPPVPTSALVSLQASNTTPGFNLSSSATSHRNPVLSRVAANASGKSKQQDSSELEIDPWTLLEDGAGSCPSASNTPSIGGGDANLRAASWLKGAVRVRRTDLTYVGPVDDDS 2121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01076 2121 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 1867 2121 - -
Tsu08g01076 2121 MobiDBLite consensus disorder prediction 1 30 - -
Tsu08g01076 2121 MobiDBLite consensus disorder prediction 860 886 - -
Tsu08g01076 2121 PANTHER RNA POLYMERASE II TRANSCRIPTION MEDIATORS PROTEIN 1867 2121 - -
Tsu08g01076 2121 MobiDBLite consensus disorder prediction 889 906 - -
Tsu08g01076 2121 MobiDBLite consensus disorder prediction 860 906 - -
Tsu08g01076 2121 SMART Med12_2 159 220 IPR019035 GO:0003712|GO:0006357|GO:0016592
Tsu08g01076 2121 MobiDBLite consensus disorder prediction 610 626 - -
Tsu08g01076 2121 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 1 1860 - -
Tsu08g01076 2121 MobiDBLite consensus disorder prediction 1 44 - -
Tsu08g01076 2121 Pfam Transcription mediator complex subunit Med12 161 220 IPR019035 GO:0003712|GO:0006357|GO:0016592
Tsu08g01076 2121 MobiDBLite consensus disorder prediction 604 626 - -
Tsu08g01076 2121 PANTHER RNA POLYMERASE II TRANSCRIPTION MEDIATORS PROTEIN 1 1860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01076 Tsu-Chr8 11800224 11812573 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01076 - - gmx:100781696 2838.91