Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01072 ATGGCTGTCGGTACCATTTTATGTGCTTCTTATTGGTCTGCTTGGACGGCCAGAGAAGCGGCTATTGAACAAGAGAAGCTTTTAAAGGATGCTTCAGATGACTATGTTGCAGAAAGTGTTGGTTCTCGTGGTTACGTGGAAATCAGTACCACAGCAGCAATTTTATTTGTTGTGCTTGCTTCTTGTTTCTTGGTTATGCTATACAAATTAATGTCATTCTGGTTTGTTGAAATTCTGGTGGTTCTATTTTGCATCGGTGGGATAGAGGGACTGCAAACTTGTTTGGTGGCTCTATTATCATGTTTCAGATGGTTTCAACATCCTGCACAAACATTTGTGAAGATACCGTTCTTTGGAGCTGTTCCATACCTGACTCTTGCTGTCACTCCCTTCTGCATAGTGTTTGCTGTTGTTTGGGCAGTTAAACGTCATGCATCATATGCTTGGATTGGTCAAGATATTCTTGGTATCGCGTTGATAATTACAGTTCTTCAGATTGTTCGCATACCAAATCTCAAGGTTGGGACTGTTCTTCTCAGTTGTGCTTTCCTATATGACATATTATGGGTTTTCGTCTCTAAATGGTGGTTTCATGAGAGTGTGATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAGGACGGTATTCCCATGCTTCTCAAGTTACCACGTTTGTTTGATCCTTGGGGTGGCTACAGTATTATCGGTTTTGGGGATATAATCTTACCGGGACTTCTAGTAGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAACCTTCGAGCCGGATACTTCGTGTGGGCAATGACTGCTTATGGTTTAGGTCTCCTCATCACATATGTGGCTTTAAACTTGATGGATGGACATGGCCAGCCAGCTCTACTTTATATAGTCCCATTTACACTCGGCACTTTTCTGTCATTGGGAAAGAAGAGAGGTGATCTTAAGATTTTATGGACGCGAGGAGAACCAGAAAGACCTTGTCCTCATCATATTCAAGAAGATAATTAA 1014 0.4181 MAVGTILCASYWSAWTAREAAIEQEKLLKDASDDYVAESVGSRGYVEISTTAAILFVVLASCFLVMLYKLMSFWFVEILVVLFCIGGIEGLQTCLVALLSCFRWFQHPAQTFVKIPFFGAVPYLTLAVTPFCIVFAVVWAVKRHASYAWIGQDILGIALIITVLQIVRIPNLKVGTVLLSCAFLYDILWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKLPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRAGYFVWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGDLKILWTRGEPERPCPHHIQEDN 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01072 337 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 1 337 - -
Tsu08g01072 337 PANTHER SIGNAL PEPTIDE PEPTIDASE 1 337 IPR007369 GO:0004190|GO:0016021
Tsu08g01072 337 SMART psh_8 44 313 IPR006639 GO:0004190|GO:0016021
Tsu08g01072 337 Pfam Signal peptide peptidase 44 324 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01072 Tsu-Chr8 11742817 11749232 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01072 K09597 - gmx:100779540 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01072 08 11742817 11749232 Tsu08g01072 08 11742817 11749232 ECH