Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01068 ATGTCAGAAACTGACATGGCAGTTATTAAACCTGAGaTGATGAAGCCTTATGTGTGGCTTCAAACGTCCGACGATTCAATCCAACAAGTGGAACAAGAGATTGCGATGTTTTGCCCCTTTATATGTCAAGAAATAATACAAAAAGGCATGGGAACTTCCAAGAATTGTGCAATATGTCTTCCTCAACAAGTCAGTCCGGCAATGTTGAGCTTAATTCTTGATTACTGTCGATTTCATCAAGTGCTGGGCCGCTCAAACAAGgaACGGAAGGCGTATGATGAGAAATTTGTTAGGATAGACACAGAGAAGCTCTGTGAGTTGACGTCTGCTGCGGACAGCCTTCAGTTAAAGCCATTGGTTGACCTCACCAGTCGTGCACTAGCTCGAATAATTGAAGGAAGATCACCGGAGGAGATACGTGACATATTTCATTTGCCTGATGATCTTACAGAGGAAGAAAAATTGGAGCCCTTGAGAAACATAACTGACGACCCAAGAATTAGACTTTTGAACCGCTTGTATGCCAAGAAGAGGAAAGAACTTAAAGAGCGTGAAAGGATAAAGaatgttgaagttgaagaagaacATGTAGATGAGCGTTCAGTTGATGACCTTTTGTCTTTTATTAATGGAAATGATAGAGATCCGAAGGGGATTAAAACTTCcaagaataaaaagaagaacCGAAGGAAAAAAGACCAACAGAAGAATTCGTCTTCGAAGGAGGAAATATCTGTACCAGATAAGAAGGAGGTGCTAAATGGCCATAATATCAGACACCAAAGTTCAGAAACTGATGGACCTTGTGAGACCTCAAATTTACACCATAATTTACACCATACATATGATGATCCTATGCTTGAGTTCGATGATGATGATACAGATGATGAGATTGATCCAGCATTAAAAGCAAAAATTGACAGGGAAGTCGAAGATTTTGCCCGCAGATTAAATTGTGACTGGCCAGAGAGAATAAAAGACTTTTTCTCGTCAACGCAAGAAAGGAAGACAATGCTTTCTACTACCAATGGGAATGGTTTTCTAAGGCGACATGCTTGA 1059 0.39 MSETDMAVIKPEMMKPYVWLQTSDDSIQQVEQEIAMFCPFICQEIIQKGMGTSKNCAICLPQQVSPAMLSLILDYCRFHQVLGRSNKERKAYDEKFVRIDTEKLCELTSAADSLQLKPLVDLTSRALARIIEGRSPEEIRDIFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYAKKRKELKERERIKNVEVEEEHVDERSVDDLLSFINGNDRDPKGIKTSKNKKKNRRKKDQQKNSSSKEEISVPDKKEVLNGHNIRHQSSETDGPCETSNLHHNLHHTYDDPMLEFDDDDTDDEIDPALKAKIDREVEDFARRLNCDWPERIKDFFSSTQERKTMLSTTNGNGFLRRHA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01068 352 Pfam Skp1 family, dimerisation domain 117 154 IPR016072 GO:0006511
Tsu08g01068 352 SUPERFAMILY Skp1 dimerisation domain-like 91 159 IPR036296 GO:0006511
Tsu08g01068 352 SUPERFAMILY POZ domain 16 80 IPR011333 -
Tsu08g01068 352 PANTHER SKP1 1 263 IPR016897 GO:0006511
Tsu08g01068 352 SMART skp1_3 15 116 IPR001232 GO:0006511
Tsu08g01068 352 MobiDBLite consensus disorder prediction 235 253 - -
Tsu08g01068 352 MobiDBLite consensus disorder prediction 207 253 - -
Tsu08g01068 352 Pfam Skp1 family, tetramerisation domain 18 80 IPR016073 GO:0006511
Tsu08g01068 352 Gene3D Potassium Channel Kv1.1; Chain A 12 161 IPR011333 -
Tsu08g01068 352 PANTHER SKP1-LIKE PROTEIN 20 1 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01068 Tsu-Chr8 11723915 11731072 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01068 - - gmx:100794666 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01068 08 11723915 11731072 Tsu08g01068 08 11723915 11731072 ECH