Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01064 ATGTCACCGCCGAAACTGAAAGGTAACTTCCCTCCGATAACCGAATGCAACGGAGCTTCTTCGAAATATGAATCCGTCGCTGCTGATCTCGATGGAACTCTTCTCATTTCTCGAAGCTCTTTTCCTTACTTCATGCTTGTTGCTGTTGAAGCTGGAAGTTTCCTCCGTGGCttcattcttcttctctcactTCCTTTTGTTATCATCGCTTATCTCTTTGTTTCTGAAGCTCTCGGAATTCAGATTCTGATTTTCATCTCATTCGCCGGTCTCAAAATCCGTGATATCGAACTCGCTTCACGCGCTGTTCTTCCAAGATTTTATGCTGCGGATGTGAGGAGAGAGAGTTTTGAAGTTTTTGATCGGTGTAAGAGGAAGGTAGTAGTGACGGCGAATCCGACGGTGATGGTGGATGCGTTTGTGAAGGATTATCTCGGTGGAGATAAGGTTTTGGGAACGGAAATTGAGGTGAATCCTAAGACGAAGAAGGCAACTGGATTTGTGAAGAAGCCTGGTGTGCTTGTTGGAGATTTGAAGCGTTTGGCGGTTGAGAAAGAGTTTGGGGAAGAATCGCCTGATGTTGGACTTGGAGATCGGAAAACTGATCATGATTTCATGTCAATTTGCAAGGAAGGGTATATGGTACCTCCAAGCAAATCAGCAAAACCAGTCCCACAAGAGCGTCTCAAGAGCCGAATCATCTTCCACGATGGCCGCTTCGTACAGCGTCCAGACCCACTAAACGCCATTATCACCTTTGCCTGGCTCCCCTTTGGCTTCATCCTCTCCATCATCAGAGTCTACTTCAACCTCCCTCTCCCTGAACGCATTGTTCGTTACACCTACGAAATACTTGGCATCAAGTTGGTAATCCGTGGCAACCGACCTCCACGACCTTCTCCAGGATCCCCCGGAAACCTTTATGTCTGCAACCACCGTATGGCCCTCGACCCTATTGTCATCTCCATTGCCCTTGGCCGCAAAGTCTATTGTGTCACTTACAGTGTCAGCAAACTTTCCCGCCTCCTCTCACCAATCCCTGCCATCGCCCTCACCCGTGACCGCGCTGCTGATGCAGCCCGGATCACTGAGCTTCTTCAGAAGGGTGACCTCGTTGTATGCCCAGAAGGCACCACCTGTCGTGAGCCTTTCTTGCTACGTTTCAGTGCTCTGTTTGCTGAGCTGAGTGATAGGATTGTCCCCGTAGCTGTTGATTGCAAGCAGAACATGTTTTATGGGACCACAGTTCGTGGAGTTAAATTCTGGGACCCTTATTTCTTTTTCATGAATCCTAGGCCTGTTTATGAGATCAATTTCCTTGACCGGTTACCTGAAGAAATGTCGGTTAAAGCTGGTGGGAAATCTTCGATTGAGGTTGCTAATCATGTGCAGAAAGTTTTGGGGGATGTGCTTGGATTTGAGTGTACCAGTTTGACAAGGAAAGATAAGTATTTGTTGCTGGGAGGAAATGATGGGAAGGTGGAGTCAATGTATGGTACCAAAAAGTGA 1509 0.4698 MSPPKLKGNFPPITECNGASSKYESVAADLDGTLLISRSSFPYFMLVAVEAGSFLRGFILLLSLPFVIIAYLFVSEALGIQILIFISFAGLKIRDIELASRAVLPRFYAADVRRESFEVFDRCKRKVVVTANPTVMVDAFVKDYLGGDKVLGTEIEVNPKTKKATGFVKKPGVLVGDLKRLAVEKEFGEESPDVGLGDRKTDHDFMSICKEGYMVPPSKSAKPVPQERLKSRIIFHDGRFVQRPDPLNAIITFAWLPFGFILSIIRVYFNLPLPERIVRYTYEILGIKLVIRGNRPPRPSPGSPGNLYVCNHRMALDPIVISIALGRKVYCVTYSVSKLSRLLSPIPAIALTRDRAADAARITELLQKGDLVVCPEGTTCREPFLLRFSALFAELSDRIVPVAVDCKQNMFYGTTVRGVKFWDPYFFFMNPRPVYEINFLDRLPEEMSVKAGGKSSIEVANHVQKVLGDVLGFECTSLTRKDKYLLLGGNDGKVESMYGTKK 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01064 502 PANTHER ANCIENT UBIQUITOUS PROTEIN 7 500 - -
Tsu08g01064 502 Pfam haloacid dehalogenase-like hydrolase 27 206 - -
Tsu08g01064 502 Gene3D - 106 230 IPR023214 -
Tsu08g01064 502 Pfam Acyltransferase 304 395 IPR002123 GO:0016746
Tsu08g01064 502 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 224 492 - -
Tsu08g01064 502 PANTHER BNAC05G00450D PROTEIN 7 500 - -
Tsu08g01064 502 SMART plsc_2 306 407 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01064 Tsu-Chr8 11699738 11704268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01064 1 502 Acyl Lipid Metabolism Gene Families AT4G00400 81.275 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01064 K13508 - gmx:100794137 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01064 08 11699738 11704268 Tsu08g01064 08 11699738 11704268 ECH