Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01063 ATGGCTATGAGCGGTTTGATTTCTAACCGTAATTTTGGTTCCTTCATTACCTCAGGGAATTCATATAGATCACAAAAGGATCTGTCGATTCAAAGAGGGGGAATTTCTGTTTCGGGTGTATCAGTTACACAGTATGATGGCAGGATTGCGAAGGATCATCTTTCAAGATGCCAGAATGGGATGCATTCTCATATTGATTCTTCTTTGGAAGAGAGAGTTtcaaaacaaatacaaacaTTCAATAACAAAAGGGAGTTTTTTTCTCCATTATCTCGACAATCCAACCGCTGCTCGAACTTCAAATTAAAAGCTTGCAAAAGAAGTCATTCTTACCTTTCTTCAGCTCCCTTTAGCAGTAGCTATATCGAACAATTTGGTTTGAGCAAAAGAAAGCACCGACAACCTGAGGTTGGTAAAGCAAATAAGTTTCGTGTTTGTTACAAGTCTGAGGATTATGAATTTGCAGAACCAAATATAGATAAGCTGCAATCAACTGAAGGGACTGGTGAAGCCATTCTTTTGGAAGGAAATCTGCATCAAATATCTCCTTGGTGGCAGCAGTTTCCTAAGCGTTGGGTTATTGTACTGCTGTGTTTTACAGCTTTTCTTCTCTGTAATATGGATCGCGTAAATATGAGCATAGCAATACTTCCAATGTCTCAAGAGTTCAACTGGAACAGTGCAACAGTTGGCCTAATTCAGTCCTCTTTTTTCTGGGGTTATCTACTTACACAGattGTTGGTGGCATTTGGGCAGACAAAGTTGGTGGGAAGCTAGTACTAGGTTTTGGAGTTATATGGTGGTCAATTGCAACAGTTTTAACTCCTGTTGCTGCAAAACTTGGGCTGCCATATCTGCTTGTTATGCGTGCGTTTATGGGAATTGGTGAGGGTGTTGCAATGCCTGCAATGAATAATATACTTTCCAAGTGGATTCCAGTATCAGAGAGAAGCAGATCACTTGCGCTAGTATATAGTGGAATGTACCTTGGTTCTGTCACAGGCTTGGCCTTCTCGCCTTTTCTAATTCACAAATTCGGGTGGCCATCCGTGTTTTACTCATTTGGATCACTCGGAAGTATCTGGTTTGCCTTGTGGTTGAAAAAAGCATATAGCACGCCAAAAGATGATCCAGATCTTGGGGAGGAAGAGAAAAGGCTCATACTTGGAGGCAGCGTATCAAAAGAACCCGTGACAGTTATTCCTTGGAAATTGATTTTATCAAAAGCACCTGTTTGGGCTTTAATAGTCTCTCACTTCTGCCACAATTGGGGAACATTTATTCTATTAACCTGGATGCCTACATACTACAATCAGGTTCTGAAGTTCAACCTCACAGAATCGGGGCTCTTATGTGTCCTTCCATGGTTAACCATGGCCATTTTTGCAAATATAGGAGGTTGGATTGCCGACACACTTGTGAGCAAAGGCCTTTCCATAACAACTATCATGCAATCAATAGGGTTTCTAGGTCCTGCATTTTTTCTTACACAGCTAAGTCATGTCAGAACACCTGCCATGGCAGTACTGTGCATGGCTTGCAGTCAGGGATGTGACGCATTCTCACAATCTGGTCTATATTCCAATCACCAAGACATTGGACCACGCTATGCGGGAGTTCTGCTGGGACTGTCAAATACAGCAGGAGTGCTTGCCGGTGTATTTGGTACAGCTGCGACTGGATACATACTCCAACGAGGTTCATGGAACGATGTATTTAAAGTCTCTGTTATATTGTACTTAGTTGGCACTTTGGTCTGGAATATCTTTTCAACTGGTGAAAAAATTCTCGACTGA 1797 0.4146 MAMSGLISNRNFGSFITSGNSYRSQKDLSIQRGGISVSGVSVTQYDGRIAKDHLSRCQNGMHSHIDSSLEERVSKQIQTFNNKREFFSPLSRQSNRCSNFKLKACKRSHSYLSSAPFSSSYIEQFGLSKRKHRQPEVGKANKFRVCYKSEDYEFAEPNIDKLQSTEGTGEAILLEGNLHQISPWWQQFPKRWVIVLLCFTAFLLCNMDRVNMSIAILPMSQEFNWNSATVGLIQSSFFWGYLLTQIVGGIWADKVGGKLVLGFGVIWWSIATVLTPVAAKLGLPYLLVMRAFMGIGEGVAMPAMNNILSKWIPVSERSRSLALVYSGMYLGSVTGLAFSPFLIHKFGWPSVFYSFGSLGSIWFALWLKKAYSTPKDDPDLGEEEKRLILGGSVSKEPVTVIPWKLILSKAPVWALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVSKGLSITTIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGCDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVSVILYLVGTLVWNIFSTGEKILD 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01063 598 ProSiteProfiles Major facilitator superfamily (MFS) profile. 194 595 IPR020846 GO:0022857
Tsu08g01063 598 CDD MFS_SLC17A9_like 195 591 IPR044777 -
Tsu08g01063 598 PANTHER SOLUTE CARRIER FAMILY 17 54 598 - -
Tsu08g01063 598 PANTHER ASCORBATE TRANSPORTER, CHLOROPLASTIC 54 598 - -
Tsu08g01063 598 Pfam Major Facilitator Superfamily 198 556 IPR011701 GO:0022857|GO:0055085
Tsu08g01063 598 Gene3D MFS general substrate transporter like domains 406 595 IPR036259 -
Tsu08g01063 598 Gene3D MFS general substrate transporter like domains 189 378 IPR036259 -
Tsu08g01063 598 SUPERFAMILY MFS general substrate transporter 180 590 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01063 Tsu-Chr8 11685702 11690906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01063 1 598 Organic Solute Cotransporters AT4G00370 70.882 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01063 K08193 - gmx:100793618 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01063 08 11685702 11690906 Tsu08g01063 08 11685702 11690906 ECH