LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu08g01048	ATGTCTTTCAATTCGATTCTGTGTTGTCATCAAACACTGATTCTCCTCAGTGTTTTGTTACTTTTCACTTCTTCACATAATAATAATCTATGTTCTGCAAACGATCAACTAAATAATAGCACTGATGGTTTCTTCACTATTTCCAGTTTCACCTACCCTCAAACTACTCTTAAACCCTTTGATTTTCATTATATAAGAGTTGATATACCGCCATGGTTTTCCGCAGTCTCCATAGCATTGAATTCAGATGTAGACCTTGACGTTGCAAAAATCGAAAGGGTTCCAAAAAGATCACTGCCAATAATATGCTTTAGAGATGGAAGTCCTCCTCTACCAGATGCTTTAAACACATCTCTGAAATATTCAGCTATCTCAGgAATAAATGGTCTTGATACGGAGCAGTGCTTTCCTATGGAGAAAAATATCACTATGAAATTGACTAATGAGCTGATATCTCCAGGTGCTTGGTACATTGGTCTTTTCAACGGCATAGGAGATGCAAGAACACAATCAAGGATGATTATTCGAGGCCCATCGTACTCCTTTAGTGCCAATATAAGTGTCGAAGCTTGCACAAATTCGATGATGAGAGGGGAGTTCTGTAACAGCACCGTCAATCCACTTTCATGTATAGCATCTGATGTCTATAATTCTACGAAGGCGGCTACACCGAAGAAGCCAACGATTGAAAATGCGGTGACCTGCAAAAGTAACTTCGAAACATTGTGTGTTCAGGAAGGCGTACCGAACTTATATTCCCTGGATATAAATAATGTAGTCGAAGAATTGACCATTATGGCTGGAAATATCAGATTCAATATTACACCTTCTAGTAACGCTTCTAATGCAAGTGATGttaatttattgtgttttgCTCGCCACGGTGCAATACCTGCAAATAGTTTGTATGATTATTCCAGTGATTTAAATAAAGCCCCTCTGGTTATTCGTTCTCCACTGATCGGTCGTTGGTACATTAGTGTATTACCGGTTAATCTTACAAAAAAGTTTGGAGAGACTCATGACGGTGATGTAAAAGTTTGCTATTCCCTTGAATCACAAATGCTTCAGTGTCCACTTGGAAAAGCTGGACCAAATTGTACAACGAGTAGCTACGCACTTCAGACAGTTCTAAGGACAAGTCCAAACCCGTTTGAATCATATTATTTGCCAATTGGTGAAGGGGCATCTTCTTCTGCCAATTTTCCTCTCGAACCACTTTTAAATAACTCATCAAACTTCGGAGAAGCTAATGACATTTGGACTTATTTTACTTTCGACATTCCTCGTGGTGCAGCTGGCCGAAACATTCACATACGGCTATCCTCAGATACGAAGATCAATTACGAAGTTTATGCTAGATTCGGTGGATTGCCTTCTGTTGATATCTGGGACTATTATTATGCTAACAAGACAAGGAAAAGCGACCAATCAATGTTTTTCATGCTATATGATTCAAACGACAACAATGTTGATTTTTACATTATTTATGCTAGAGAAGGAACTTGGAGTTTTGGTCTAAGACGTGTCAATACTAGCAGTGATTCTTTGAAACAGAAAACTAGCATGTCTATTTCACTTGAAGGATGCCCAAAACAATGTTCCTCTCATGGAAGCTGTaaatatgcttttgatgctacCGGATTGACGTCATACAGCTTCTGTTCTTGTGATCGAAACCATGGTGGCTTTGACTGTAGCGTCGAAATTGTGTCACATAAAGGGCACATACTTCAATCAATTTTTCTGATAGGATCAAATGCTGCAGCAATACTTCCTGCTTTTTGGGCACTTCGACAGAAGGCATATGCAGAATGGGTTATATTCACAGCGAGTGGAATTTCAAGTGGAATATATCATGCATGCGATGTAGGCACCTGGTGTGCATTGAACTTCGGTGTTCTACAGTTTATGGACTTCTGGCTCTCTTTTATGGCCGTGATTAGCACTTTTGTATACCTAGCTACCATCGACGAAGTATATAAGAGGGCAATCCACACAACTGTTTTTATCTTTACTGCTCTCATGTCGGTAACTAATGCAACCAGGTCTTCAAATATTGTTCTTGTGATTGTGATTGGGGCTCTTGGTCTTCTTATCGGATGGTTGATAGAAATGTCAACAAAGTATAGGTCCCTTTCATTTTCATTTGGATTCTCGCCAAATTTCCTTCAAAGTTTGTTAACTATAAAGCTATGGTTCTATAATCTTGTGAAGACACTTTTGAGACGGTTCCGTTGGGGTTTTATATTGGCTGGATTCGCCGCATTAGTCATGGCAGGAGCAAGCTGGATGCTTGAAACAAGTGACACCTACTGGATTTGGCATAGCTTTTGGCATGCTACAATATACacatcttctttcttcttcctttgttCAAAAGCAAATATTGTTGATGCTGAGAATCAGTTACCTAGAAGCGAAAACTATGCTCTAACTCGTCAGGattcattttcaagagaatag	2466	0.3824	MSFNSILCCHQTLILLSVLLLFTSSHNNNLCSANDQLNNSTDGFFTISSFTYPQTTLKPFDFHYIRVDIPPWFSAVSIALNSDVDLDVAKIERVPKRSLPIICFRDGSPPLPDALNTSLKYSAISGINGLDTEQCFPMEKNITMKLTNELISPGAWYIGLFNGIGDARTQSRMIIRGPSYSFSANISVEACTNSMMRGEFCNSTVNPLSCIASDVYNSTKAATPKKPTIENAVTCKSNFETLCVQEGVPNLYSLDINNVVEELTIMAGNIRFNITPSSNASNASDVNLLCFARHGAIPANSLYDYSSDLNKAPLVIRSPLIGRWYISVLPVNLTKKFGETHDGDVKVCYSLESQMLQCPLGKAGPNCTTSSYALQTVLRTSPNPFESYYLPIGEGASSSANFPLEPLLNNSSNFGEANDIWTYFTFDIPRGAAGRNIHIRLSSDTKINYEVYARFGGLPSVDIWDYYYANKTRKSDQSMFFMLYDSNDNNVDFYIIYAREGTWSFGLRRVNTSSDSLKQKTSMSISLEGCPKQCSSHGSCKYAFDATGLTSYSFCSCDRNHGGFDCSVEIVSHKGHILQSIFLIGSNAAAILPAFWALRQKAYAEWVIFTASGISSGIYHACDVGTWCALNFGVLQFMDFWLSFMAVISTFVYLATIDEVYKRAIHTTVFIFTALMSVTNATRSSNIVLVIVIGALGLLIGWLIEMSTKYRSLSFSFGFSPNFLQSLLTIKLWFYNLVKTLLRRFRWGFILAGFAALVMAGASWMLETSDTYWIWHSFWHATIYTSSFFFLCSKANIVDAENQLPRSENYALTRQDSFSRE	821

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu08g01048	821	PANTHER	FIVE-SPAN TRANSMEMBRANE PROTEIN M83	15	820	IPR021910	GO:0016021
	Tsu08g01048	821	ProSitePatterns	EGF-like domain signature 1.	555	566	IPR000742	-
	Tsu08g01048	821	PANTHER	TRANSMEMBRANE PROTEIN-LIKE PROTEIN	15	820	-	-
	Tsu08g01048	821	Pfam	Protein of unknown function (DUF3522)	576	780	IPR021910	GO:0016021

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu08g01048	Tsu-Chr8	11489594	11496964	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu08g01048	-		-	gmx:100777848	1287.71