Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01036 ATGAAAACCCATTTCAAAGACCCAGATCACAATACTCTTTACTCTTCAATCACTTTCTCAAAACTCATCACTTTCTTTTTCATCTTAATCACTATTTCTTACCTTTTTTATTCCCTCAAATTTGTCACTCATAACTATGATTGTGATAATGTTAATCATATTAATCAAAATCACCACAACCCCATCATTCATAGTCACACAAATTTCCAATCTTTtgaacaatcatcatcatcaaaatcagaaTCAATACCAACCAACATTTCTCATATAGTGTTTGGAATTGGTGCATCAGCAAAACtatggaaaaaaagaaaagaatacaTAAAACTATGGTGGAAACCAAATGAAATGAGAGGCATTGTTTGGTTAgaacaaaaagtaaaaattgattCTTATGATGAAAATCTTTTACCCCTTTTGAAGATctctgaagaaacaacaaatttcaagtaCAAAAATCCAAAGGGTCATCGGTCGGCTATAAGAATATCAAGAATAGTTTCAGAAACAGTAAGACTTGGTATGGAAAATGTGAGATGGTTTGTTATGGGTGATGATGATACATTTTTTGTTGCTGAGAATTTGATTAATGTTTTGAAGAAATATgatcataatcaattttattatattggtAGTAGTTCAGAAAGTCatttgcaaaatatttatttttcttataatatggctTATGGTGGTGGTGGATTTGCTATAAGTTATCCTTTAGCTATTGCTTTGGAGAAAATGCAAGATAGATGTATTCAAAGATATCCTGGATTGTATGGTTCTGATGATAGGATTCAAGCTTGTATGGCTGAGCTTGGTGTTCCACTTACTAAGGAAAAAGGGTTTCATCAGTTTGATGTGTATGGGAATCTCTTTGGGCTTCTAGCAGCCCATCCCGTTACACCGCTGGTATCCCTTCACCACTTGGACGTCGTGGAGCCCATATTTCCGAATGTTAGTCGGGTCCAAGCCCTAAAGCGGCTTACGGTGCCGATGAGTTTGGACCCGGCTGGACTCATCCAACAATCCATTTGCTATGACAAAACACGGACTTGGACCATATCTGTGTCATGGGGCTATGCGGTTCAAATATTTCGGGGCACTTTTTCTGCCCGAGAGATGGAGATGCCGGCGAGGACCTTCCTAAATTGGTACAAGCGAGCTGATTACACCGCCTATCCGTTCAACACACGCCCCGTTAGCCGAAATGTTTGTCaaaatccatttatttattacttgTCTAATGTGGTATATGATGAGGATACAGACGAGACTGCAAGTCGATATGTCCGGGTTCAATCGAATCCGGATTGCAAGTGGAAAATGGAGGATCCTTCTCAAATCAAAACGGTAGTGGTTTATAAAAAACCCAACCCGCATTTGTGGGACAAGTCTCCAAGAAGAAATTGTTGCAAGGTTCGAAATACAAAGAGGAAAGGAACTATGATGATTGATGTGGGAGAATGCAGAGAAGATGAAGTTGTTGAATTGTAG 1494 0.3501 MKTHFKDPDHNTLYSSITFSKLITFFFILITISYLFYSLKFVTHNYDCDNVNHINQNHHNPIIHSHTNFQSFEQSSSSKSESIPTNISHIVFGIGASAKLWKKRKEYIKLWWKPNEMRGIVWLEQKVKIDSYDENLLPLLKISEETTNFKYKNPKGHRSAIRISRIVSETVRLGMENVRWFVMGDDDTFFVAENLINVLKKYDHNQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAIALEKMQDRCIQRYPGLYGSDDRIQACMAELGVPLTKEKGFHQFDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNVSRVQALKRLTVPMSLDPAGLIQQSICYDKTRTWTISVSWGYAVQIFRGTFSAREMEMPARTFLNWYKRADYTAYPFNTRPVSRNVCQNPFIYYLSNVVYDEDTDETASRYVRVQSNPDCKWKMEDPSQIKTVVVYKKPNPHLWDKSPRRNCCKVRNTKRKGTMMIDVGECREDEVVEL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01036 497 PANTHER FRINGE-RELATED 11 495 - -
Tsu08g01036 497 Coils Coil 495 497 - -
Tsu08g01036 497 Pfam Protein of unknown function, DUF604 219 471 IPR006740 -
Tsu08g01036 497 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 11 495 - -
Tsu08g01036 497 Gene3D - 76 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01036 Tsu-Chr8 11361584 11367019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g01036 20 491 Glycosyltransferase AT5G41460 64.417 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01036 - - gmx:100789583 829.706