Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01023 ATGAAGAAGTTTGTGCTCAAGTTAGAGTTACATGATGACAAGGATAAGAAGAAAGCACTCAAAACAGTTTCAACTCTTTCAGGGATTGATGCCATCTCAATGGacatgaaagaaaagaaattaacaGTGATTGGAACAGTAGATCCAGTAAATGTGGTGAGCAAATTGAGAAAATTTTGGCACACTGAAATAATAGCTGTTGGACCAGCAAAAGAGCctgagaagaagaaagaagaaccCAAGAAAGAgggagaaaagaaagaagaaggaaagaaagaagaggGAAAGAAAgatgaaggaaagaaagaagaagagaagaaaaaagaagcaCCTCCACCACCAGATCCTATTCAAGAATGGGTTAGGAATTATAGGGCATATAATCCCTATATGACAACACATTACCATGTTCAAAGCATGGAAGAGAATCCTAATGCATGTGTCATTTGTTAA 453 0.2804 MKKFVLKLELHDDKDKKKALKTVSTLSGIDAISMDMKEKKLTVIGTVDPVNVVSKLRKFWHTEIIAVGPAKEPEKKKEEPKKEGEKKEEGKKEEGKKDEGKKEEEKKKEAPPPPDPIQEWVRNYRAYNPYMTTHYHVQSMEENPNACVIC 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01023 150 Gene3D - 1 72 - -
Tsu08g01023 150 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 150 - -
Tsu08g01023 150 SUPERFAMILY HMA, heavy metal-associated domain 2 59 IPR036163 GO:0046872
Tsu08g01023 150 MobiDBLite consensus disorder prediction 68 113 - -
Tsu08g01023 150 MobiDBLite consensus disorder prediction 67 120 - -
Tsu08g01023 150 Pfam Heavy-metal-associated domain 10 58 IPR006121 GO:0046872
Tsu08g01023 150 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01023 Tsu-Chr8 11237294 11239293 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01023 - - gmx:100819572 155.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01023 08 11237294 11239293 Tsu08g01023 08 11237294 11239293 ECH