Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01014 ATGTCGTTTCTAAGGTCTATACTCCGAACAACAACTCTTCACCATTCATCTCTTCAAAAACACATTCGTTCCATGAGCAATCTACCAGAAAACACAGTATATTCAGGACCAACACCACAAAATAAAAGGGTAACACTTTCACAACTTCGACAAAAACATCGAAACTCAATACCAATAACAATGGTAACTGCTTATGATTACCCTTCTGCTGTTCACCTTGATACAGCCGCCATTGATATATGTCTTGTTGGTGATTCTGCTTCCATGGTTGTTCATGGTCATGACACTACTTTGCCTATTACTTTAGATGAAATGCTTGTTCATTGTCGTGCTGTTGCTCGTGGTGCTAAGACTCCTCTTCTTGTTGGTGATTTGCCTTTtggaacttatgaatgtagttcTAAACAGGCAGTGGACGCGGCAGTTCGGATTTTGAAAGAAGGAGGAATGGATGCCATAAAATTGGAAGGAGGTTCACCATCAAGAATTGTTGCAGCAAAAGCTATTGTTGAAGCTGGAATAGCTGTGATTGGGCATGTTGGTCTTACTCCACAGGCTATTAGTGTTTTAGGTGGATTTAGGCCTCAAGGAAGGAATGTTGCTAGTGCTGTCAAGGTTGTGGAGACGGCATTGGCTTTGCAAGAAGCAGGGTGTTTTGCTGTTGTTCTAGAATGTGTGCCTGCACCTGTGGCTGCTGCAGCAACAGCAGCGCTTCAAATTCCGACTATTGGAATCGGGGCTGGACCCTATTGCAGTGGACAGGTACTTGTTTATCATGATCTGCTTGGTATGTTACAACACCCCCACCATGCAAAGGTTACTCCAAAATTTTGTAAACAATACGCTCGTGTCGGAGATGTCATCAACAAAGCCTTAGTTGATTATAAGGAAGATGTGATAAATGGTTCATTTCCTGATGCTCAACACAGTCCATACAAAATCAGTGAAACTGATGCCAATGGTTTCTTAAATGAACTGCAAAAGTTAGGTTTTGACAAAGCAGCATCCGCGACATCTGAAGCAGTTCAGAAGATGGTTACAAATAAAGTGATAATTTAG 1059 0.4108 MSFLRSILRTTTLHHSSLQKHIRSMSNLPENTVYSGPTPQNKRVTLSQLRQKHRNSIPITMVTAYDYPSAVHLDTAAIDICLVGDSASMVVHGHDTTLPITLDEMLVHCRAVARGAKTPLLVGDLPFGTYECSSKQAVDAAVRILKEGGMDAIKLEGGSPSRIVAAKAIVEAGIAVIGHVGLTPQAISVLGGFRPQGRNVASAVKVVETALALQEAGCFAVVLECVPAPVAAAATAALQIPTIGIGAGPYCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALVDYKEDVINGSFPDAQHSPYKISETDANGFLNELQKLGFDKAASATSEAVQKMVTNKVII 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01014 352 CDD KPHMT-like 46 305 IPR003700 GO:0003864|GO:0015940
Tsu08g01014 352 Hamap 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 44 311 IPR003700 GO:0003864|GO:0015940
Tsu08g01014 352 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 43 309 IPR015813 GO:0003824
Tsu08g01014 352 Gene3D - 41 322 IPR040442 -
Tsu08g01014 352 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 22 347 - -
Tsu08g01014 352 Pfam Ketopantoate hydroxymethyltransferase 43 306 IPR003700 GO:0003864|GO:0015940
Tsu08g01014 352 TIGRFAM panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 44 310 IPR003700 GO:0003864|GO:0015940
Tsu08g01014 352 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 22 347 IPR003700 GO:0003864|GO:0015940
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01014 K00606 - gmx:100808841 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01014 08 11135291 11141202 Tsu08g01014 08 11135291 11141202 ECH