Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01007 ATGTCGAAATTCTTCTCTTTGAAATCATTTCTTGATGTTGAATCTTTTTACACTCATCTAACTCCTTCTGAGGATACAAATAGGAATAATCAAAATGAGGTGTTAGCAACTGTGCAAATTGTGATTACGAAAATTCAGAAAGAACTTGAAAAACTTAGGGAAATACATCAAAATCCATCATCATCGTCGTCACAATCTGTGTTGAAACAAGGTGCTTTCCTTGCCGACATATTAGGACTACTCGAATCTCTGCATAGTGAAGAACAAAACGGTGGTTTTGTCGTTCATCCTttgatgaaagaaaagaaacgATCGGATGAACCTGCTAATTACTTTTTGAGAGAAGAGATTCGAAAGTATGTCAGAATTAGGCCTAATAGAttaggaaaacaaaatttcatggGCGCGAACGCGACATTCACTAGCATAGGACATGCATGTTTTTCTATGAAGGAAGATTTAGAAGAGTACATGGATTATGATATTGGTGAAATATGTAATGATGATTGGAAACTAGCTCAAAAGCTTATGGTTCATGGATGTGATCCTTTACCAAGGAGAAGGTGTTTCTCAAGAGCGCCGAAGTTATACAATAAACCATTCCCTATCAAAGAATCCATGTGGAAATTACCTGATGATAGAAATGTTAGATGGAGTCAATATAGGTGCAAGAACTTTACTTGTCTCGCAAGCAACAACAACGCTCGAAAGGGATTCTTCAAGTGTGCAGATTGTTTCAATCTTACGGATCATGAGATGCCGCGATGGATAAGATTGGAAGGTgattcaatttcaaaccaaacaaGTGAAGCTGATTTTTTCATAGATGATGTTCTTGGAATTAAGTTAGGAGAGATTAGAATTGGATTGGATTTTAGTGTTGGAACAGGAACTTTTGCTGCTAGAATGAAAGAATTTAATGTGACTATAGTTTCAGCAACTATTAATCTTGGTGCACCATTTAGTGAAATGATAGCTCTTAGAGGACTTGTTCCTCTTTATTTAACTATAAATCAAAGGCTTCCATTTTTTGATAATACACTTGATTTGATTCACACAACAAGGTTTCTTGATGGTTGGATTGATTTTGtgcttttggattttattttgtatgattGGGATAGAGTTTTGAGGCCAGGAGGGTTACTTTGGATTGATAGCTTTTTTTGCTTGAAGGAagatttgtatttttatttggaaGCTTTCAAAATGTTGAGATATAAGAAGCATAAATGGATTGTTGTACCAAAGATTGATAAGGATGATAAAGAGGTGTTCTTTTCTGCTGTTTTAGAGAAACCTTCTAGGCCATTTAGGTAA 1320 0.3311 MSKFFSLKSFLDVESFYTHLTPSEDTNRNNQNEVLATVQIVITKIQKELEKLREIHQNPSSSSSQSVLKQGAFLADILGLLESLHSEEQNGGFVVHPLMKEKKRSDEPANYFLREEIRKYVRIRPNRLGKQNFMGANATFTSIGHACFSMKEDLEEYMDYDIGEICNDDWKLAQKLMVHGCDPLPRRRCFSRAPKLYNKPFPIKESMWKLPDDRNVRWSQYRCKNFTCLASNNNARKGFFKCADCFNLTDHEMPRWIRLEGDSISNQTSEADFFIDDVLGIKLGEIRIGLDFSVGTGTFAARMKEFNVTIVSATINLGAPFSEMIALRGLVPLYLTINQRLPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCLKEDLYFYLEAFKMLRYKKHKWIVVPKIDKDDKEVFFSAVLEKPSRPFR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01007 439 Gene3D Vaccinia Virus protein VP39 283 425 IPR029063 -
Tsu08g01007 439 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 2 438 - -
Tsu08g01007 439 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 281 385 IPR004159 GO:0008168
Tsu08g01007 439 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 268 408 IPR029063 -
Tsu08g01007 439 Coils Coil 35 55 - -
Tsu08g01007 439 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 2 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01007 Tsu-Chr8 11082660 11083979 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01007 - - cam:101489883 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01007 08 11082660 11083979 Tsu08g01007 08 11082660 11083979 ECH