Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01003 ATGGCTCTTCTAATTCACTCTCCGGAGATGCACGTTGCCTCTCAATTCGCacaaaaccctaaccctaaattGAGGAAATATCACAGTTTCAAACCCTACTCAAAATTGAAGGCAATTAGGTCAAAGCATGGGGTGAAAATTTCTTGCAAAGTGAAGGATTGTGcagttttggatttggattcggGTTTCGATCAGAACGTGAAGCAGTACGGTCAGTTTTCGGTTCCAGTGAAGAGTGGTTCAAGGTCAAGcaaagaggaagaggaagaaaaaCAGAATTACTATGTGAATTTGGGATATGCTATTCGAACTTTGAGGGAAGAGTTCCCTGATCTCTTCTACAAAGAACTTAGCTTTGATATCTATAGgGATGATATTGTATTGAAGGATCCCTTGAATACATTTATGGGTATTGAGAATTACAAATCAATATTCTGGAACCTAAGATTTCATGGCAAGATATTTTTCAAAGCTTTGTGGATAGACATAAATAGTGTGTGGCAACCTGCTGAGAATGTCATTATGGTTCGCTGGACCGCTCATGGTATCCCACGAGTTCCATGGGAAAGCCGTGGTAGGTTTGACGGGACCTCTGAGTATAAACTTGACAAACAAGGCAAGATTTACGAGCATCGGGTTGACAACATTGCTTTGAATAAACCTCCTTCTAGGTTTAAAGTGATATCCGTGGAAGAATTGATTCAATCTCTCACCTGTCCGTCGACCCCAGGACCAACTTACTTTGAATTATCTTCATCTAATAAGAGAAAGTAA 774 0.3708 MALLIHSPEMHVASQFAQNPNPKLRKYHSFKPYSKLKAIRSKHGVKISCKVKDCAVLDLDSGFDQNVKQYGQFSVPVKSGSRSSKEEEEEKQNYYVNLGYAIRTLREEFPDLFYKELSFDIYRDDIVLKDPLNTFMGIENYKSIFWNLRFHGKIFFKALWIDINSVWQPAENVIMVRWTAHGIPRVPWESRGRFDGTSEYKLDKQGKIYEHRVDNIALNKPPSRFKVISVEELIQSLTCPSTPGPTYFELSSSNKRK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01003 257 Pfam Uncharacterized conserved protein (DUF2358) 101 211 IPR018790 -
Tsu08g01003 257 PANTHER - 2 256 - -
Tsu08g01003 257 PANTHER RIKEN CDNA 2310061I04 GENE 2 256 IPR018790 -
Tsu08g01003 257 SUPERFAMILY NTF2-like 119 213 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01003 Tsu-Chr8 11041892 11044626 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01003 - - gmx:100792423 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01003 08 11041892 11044626 Tsu08g01003 08 11041892 11044626 ECH