Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g01000 ATGTTTCCTACATACAGAAACATGGATTCATACCCCTTTCACAGAAACCATATACCATCCCCTCATTATTATCACCCTTCCATGGAACCAATTCCCCCTCAAATGACCAAATCACCCTTCCCTTATGAACAACCTTGGCCTTATGGCAGCAATTATGGACCACATTTCTGCTATGATCATAACAACTTTCCTGGTTACTATACTCAAAGACCTTGTTACCCTCATGTTCCTCATACTCCTGCTTATTCTGGAGGTTGTCCTTTATATGGTGAACCATTTTCTGCTCCTTATTATCCACAATCACATTATACCATGGAGCTTCCAAGATATGAATATGATAAATATATGCCAAGGGAGCGTCATTGTTGCGGTTGTCCTAATCATGTGTGCAACCAAAAGGAAGATAAAACTGTGAAGATTGAGGAGCAAGAACCTAATGTTGGTAAGAAAGAGAACAATGCTATGGTTCCAATTCAGTTTAGAAATTTTCCATATCCTTATGTTTGGACTCCACAAGAGTACTATGGTGACAAACAACCGAAAAATCCTACTAAGCCTGAGGTGGAGGGGTATGAAGATAGAGTGGTACATGATAAAAAACTTACCGGCGCAGAGAATGTGAATGCTGACGTGCAACCAGCATTTGAGCCAAGATTATGGAATGGATGGTTTCCCTTTGATGTAAAAGGTGCGCCGAACATGTTTCACGATGGAGATGGAATAAAAAGCCTTAAGAAGgaaactattaataatataaaggaGTGTGAAAATGGAAGAATGGCTCAGAAGGATAAGAGTGAACAGCAAAAAAGATCTGAATTTCCATTTCCATTCATTTGGTTGCCATATATTAATAAGCAAGAGGAAGGTGGAAAAAGGATCGAATCAACTGATGTTGAGTCCAAGGATAGAAGTGCCTCTGATGTCACAGAAAGAGTGAGTAACCAGAGAAATATTCCTGTGAAGCAGATCGAACTGAATCATGTGAAGAATGACACGAAGGTAagtgaaaagagagaaatgaatCTTTCTGAAGAGAATGAGACAAAGAAAGACTCTCATTCCATCAGCAAACAACGATCAACATCTCCGCCTAAGCGATCCAAGCTACCTCCTGTTTGTCTAAGAGTTGATCCACTGCCAAGAAAGAAAAGTGGCAATGGGAGTTCAAGATCTCCAAGTCCACCAGCTTCTAAAGGACACTCCAAAGCTTGTGAAACAAACAACACTCCTTCGGACTACATGACAAATAAGACCGAGCGGAGTTCGAATATTCAAAATGTGCCAAAGGCTGGTGAGGAATTCACACCGAAGGTGAAAACTATTGAGGTATCCCAAAACATTCCTTCGGACAACATGACAAACACGACTGAGGCGAGCTCAAATATTCAGAATGTGCCGAAAACGGGTGAGGAAGTTGCCCTAAAGGTGAAAACTATTGAGGTATCTGAAGACAAGACTAATGAAAACAAGGgtgaaaacaaagaaacaaatgaaagttGCAAAAAAGAAAGGAGAGTTTTGTCGGATGCAGATGCTGCTGTTTTGATACAAGCTGTTTATCGCGGACATCTAGTGAGAAAATGGGAGTCCTTGAAGAAATTGAAGCAGATAGCTGAAGTTAGTAAGGAAGTTACTCATGTTAGAGACTGTGTCAAAGCTTTTGAAGGTTCTTCTGATTTGCAAAATGATGGCAAGCAAAAGATTGCAATTGGAGAGACCATAATGAGACTATTGCTGAAGTTGGATACTATACAGGGTTTGCATCCAAGTTTGAGGGAAATCAGAAAGTCTCTGGCTAGAGAGCTTGTGACCTTGCAGGAAAGGCTTGATTCTATAATGGTGGGTAAGTATCCTCAGCAGCAGATACAAGAGTCCGATGCTAAGGAATCTGTCGAAGCCTCTCCAATGAGTTTTCAGAATGGAGAACATAAtcaagaacatcaagaagagaCAACGACATCACAAGAAGATTCATCTGAAGTTATAAGGGATGGGAAACATCAGGATCAGTTATACATGGAGGTTAACGATGGTCGAAGTGAGAATCACGTTGATCCTGCATCAAATGAAGCAACAATGCCTACTGTGTTACTGAATCGATCAGTTAATGAGGATATTAGCCAAATGGTTGCTGATGCTGATGCGACATTGGATGGTTTGGAAGAATTGCCTGTAGGAGTTATAGACCAAAATGTCATTGGCGATTCAGCAAGTGAAGGGTTAGATTCTGATACGC 2239 0.3948 MFPTYRNMDSYPFHRNHIPSPHYYHPSMEPIPPQMTKSPFPYEQPWPYGSNYGPHFCYDHNNFPGYYTQRPCYPHVPHTPAYSGGCPLYGEPFSAPYYPQSHYTMELPRYEYDKYMPRERHCCGCPNHVCNQKEDKTVKIEEQEPNVGKKENNAMVPIQFRNFPYPYVWTPQEYYGDKQPKNPTKPEVEGYEDRVVHDKKLTGAENVNADVQPAFEPRLWNGWFPFDVKGAPNMFHDGDGIKSLKKETINNIKECENGRMAQKDKSEQQKRSEFPFPFIWLPYINKQEEGGKRIESTDVESKDRSASDVTERVSNQRNIPVKQIELNHVKNDTKVSEKREMNLSEENETKKDSHSISKQRSTSPPKRSKLPPVCLRVDPLPRKKSGNGSSRSPSPPASKGHSKACETNNTPSDYMTNKTERSSNIQNVPKAGEEFTPKVKTIEVSQNIPSDNMTNTTEASSNIQNVPKTGEEVALKVKTIEVSEDKTNENKGENKETNESCKKERRVLSDADAAVLIQAVYRGHLVRKWESLKKLKQIAEVSKEVTHVRDCVKAFEGSSDLQNDGKQKIAIGETIMRLLLKLDTIQGLHPSLREIRKSLARELVTLQERLDSIMVGKYPQQQIQESDAKESVEASPMSFQNGEHNQEHQEETTTSQEDSSEVIRDGKHQDQLYMEVNDGRSENHVDPASNEATMPTVLLNRSVNEDISQMVADADATLDGLEELPVGVIDQNVIGDSASEGLDSDT 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g01000 746 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 20 713 IPR040400 -
Tsu08g01000 746 MobiDBLite consensus disorder prediction 618 643 - -
Tsu08g01000 746 MobiDBLite consensus disorder prediction 291 424 - -
Tsu08g01000 746 Pfam IQ calmodulin-binding motif 512 529 IPR000048 GO:0005515
Tsu08g01000 746 MobiDBLite consensus disorder prediction 291 310 - -
Tsu08g01000 746 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 6 20 713 - -
Tsu08g01000 746 MobiDBLite consensus disorder prediction 618 667 - -
Tsu08g01000 746 ProSiteProfiles IQ motif profile. 510 539 IPR000048 GO:0005515
Tsu08g01000 746 MobiDBLite consensus disorder prediction 385 424 - -
Tsu08g01000 746 Pfam BAG domain 538 612 IPR003103 GO:0051087
Tsu08g01000 746 Gene3D BAG domain 525 615 IPR036533 GO:0051087
Tsu08g01000 746 MobiDBLite consensus disorder prediction 644 667 - -
Tsu08g01000 746 ProSiteProfiles BAG domain profile. 537 614 IPR003103 GO:0051087
Tsu08g01000 746 MobiDBLite consensus disorder prediction 327 357 - -
Tsu08g01000 746 SMART BAG_1 537 614 IPR003103 GO:0051087
Tsu08g01000 746 SUPERFAMILY BAG domain 530 613 IPR036533 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g01000 Tsu-Chr8 10978243 10980675 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g01000 - - mtr:MTR_8g028265 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g01000 08 10978243 10980675 Tsu08g01000 08 10978243 10980675 ECH