Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00984 atgagtacCTTTAAGGTATCATGcaatttttatgcatttttcaaGCTCTTAATAAAATGCTTAACGATATCTTCATTGATCGGTTCAAGTTACTCAATGTGTGAATTTAAGGGAATATTCAACTTTGGAGATTCAAATTCAGATACAGGTGGATTCTATTCAGCTTTTCCTGCACAGCCCAATCCTTATGGAATGACTTATTTTCAAAAGCCAGTTGGACGTTCTTCTGATGGAAGGCTCATTGTTGATTTTTTGGCTGAGGCTCTTGGATTGCCTTATTTGAGTCCATATTTACAATCAATTGGATCAGACTACACACATGGAGCCAACTTTGCAACATCAGCTTCCACTGTGCTTTTGCCCAAAACATCTTTCTTTGTAAGTGGACTCAGCCCTTTTGCTCTTCAAATACAACTTAAGCAATTGGAACAATTCAAAGCCAAAGTTCATGGTTTTCATAAAAGAGGTACACACAAAAAACTCACTAGAAATTACTTTTGtgattcaaaaatcaacaatatTCCTTCACTTGATATCTTTGAAAAGTCTATTTACATGTTCTATATTGGTCAAAATGACTTCACTTCAAAAATAGCATATGGTGGTGGTATTAATGGATGGAAAAACTACCTTCCTGAAATTATCTTTCAAATTTCTTCTGCCATCAAGGAGTTATATGCAGAAGGAGGACGTACATTTATGGTATTAAATCTTGGTCCAGTTGGATGCTATCCAGGATACTTGGTGGAGCTTCCTCATACAAATTCTGATTTAGATGAACATGGATGCATTATTTCTTACAACAATGCTGTAGATGATTACAACAAATTGTTGAAAGAGACATTAAGTCAAACTAGAGAAACTTTATCAGATGCTTCTCTAATTTATGTGGACACCAAGTCTGCTTTATTGGAGCTCTTCCACTATCCTACATCTTATGGACTAAAGTATAGTACTAGAGCATGTTGTGGCCATGGAGGTGCAGATTACAACTTTGACCCTAAAGCTTTATGTGGCAATATGCTTGCAAGTGCATGTGAAGATCCTCAAAACTATGTGAGTTGGGATGGAATTCATTTCACAGAAGCTGCAAACAAGATTGTGGCCAAAGCCATTCTCAATGGTTCTCTATTTGATCCTCCTTTCTTTCTTCATAAGCTTTGTGATCTTCAACCTATTGATTGA 1185 0.3511 MSTFKVSCNFYAFFKLLIKCLTISSLIGSSYSMCEFKGIFNFGDSNSDTGGFYSAFPAQPNPYGMTYFQKPVGRSSDGRLIVDFLAEALGLPYLSPYLQSIGSDYTHGANFATSASTVLLPKTSFFVSGLSPFALQIQLKQLEQFKAKVHGFHKRGTHKKLTRNYFCDSKINNIPSLDIFEKSIYMFYIGQNDFTSKIAYGGGINGWKNYLPEIIFQISSAIKELYAEGGRTFMVLNLGPVGCYPGYLVELPHTNSDLDEHGCIISYNNAVDDYNKLLKETLSQTRETLSDASLIYVDTKSALLELFHYPTSYGLKYSTRACCGHGGADYNFDPKALCGNMLASACEDPQNYVSWDGIHFTEAANKIVAKAILNGSLFDPPFFLHKLCDLQPID 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00984 394 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 8 392 - -
Tsu08g00984 394 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 8 392 - -
Tsu08g00984 394 SUPERFAMILY SGNH hydrolase 184 374 - -
Tsu08g00984 394 Gene3D SGNH hydrolase 29 376 IPR036514 -
Tsu08g00984 394 CDD SGNH_plant_lipase_like 39 376 IPR035669 -
Tsu08g00984 394 Pfam GDSL-like Lipase/Acylhydrolase 39 372 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00984 Tsu-Chr8 10793141 10796238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00984 38 379 Acyl Lipid Metabolism Gene Families AT4G10950 27.119 5.30e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00984 - - aprc:113850566 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00984 08 10793141 10796238 Tsu08g00984 08 10793141 10796238 ECH