Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00973 ATGTCTTCTCCTCTGATTCAACCTCTTCTATGCCTATTCCTAGCTCTTCTCTTCTTCGCCGGAACTTCTTCTCCGGCACCTGCTTCCGATGAGTTGGAGCGTGGAGGAGGTGGAAAACAGAGAGAGTTTGATTATTTCGCTTTAGCTTTACAATGGCCTGGTACTTATTGTCAACGCACGCGTAAATGTTGTTCCTCTAATGGTTGTTGCAGAGGCTCCAATTCTCCGGCAGTATTCACAATACATGGACTGTGGCCTGACTATAATGATGGAACTTGGCCGTCATGTTGCACTAAATCTAGTTTTGATCCAAAAGAGATATCAACATTGAATGATGCTTTAGAGAAATATTGGCCGTCGTTGAGCTGTAGCAAACCATCATCATGCAATGGTGGAAAAGGTTCATTTTGGGGTCATGAGTGGGAGAAGCATGGCACATGCTCATATCCCGTGGTTGGAAATGAATATGATTATTTCTTGACAACACTTAAtgtttatttcaaatataatgtTACGAGTGTTCTAAACGATGCTGGATATGTTCCGTCAAACACAGAAAAGTATCCCCTCGGAGGTATTATCTCTGCCATTGAGAATGCTTTCCACGCATCTCCTCAAATAATTTGCTCAAAAGGTGCTGTAGAGGAACTTCGTCTATGCTTCTATAAGGACTTCAAGCCACGCGATTGTGCTATTGCATCAGATGCTAAAATTGACATGGTTACTTCAAAATCATCATGTCCTAAATATGTTAGCTTGCCAGAATATGTATCAACTGGGCGGGATGGACTTCAGAGTTGGGCGTCTAACGATTCAGCTCTTTAA 825 0.417 MSSPLIQPLLCLFLALLFFAGTSSPAPASDELERGGGGKQREFDYFALALQWPGTYCQRTRKCCSSNGCCRGSNSPAVFTIHGLWPDYNDGTWPSCCTKSSFDPKEISTLNDALEKYWPSLSCSKPSSCNGGKGSFWGHEWEKHGTCSYPVVGNEYDYFLTTLNVYFKYNVTSVLNDAGYVPSNTEKYPLGGIISAIENAFHASPQIICSKGAVEELRLCFYKDFKPRDCAIASDAKIDMVTSKSSCPKYVSLPEYVSTGRDGLQSWASNDSAL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00973 274 PANTHER RIBONUCLEASE 2-LIKE ISOFORM X1 38 260 - -
Tsu08g00973 274 SUPERFAMILY Ribonuclease Rh-like 42 254 IPR036430 GO:0003723|GO:0033897
Tsu08g00973 274 Gene3D - 39 258 IPR036430 GO:0003723|GO:0033897
Tsu08g00973 274 CDD RNase_T2_euk 43 249 IPR033697 -
Tsu08g00973 274 ProSitePatterns Ribonuclease T2 family histidine active site 2. 136 147 IPR033130 -
Tsu08g00973 274 Pfam Ribonuclease T2 family 43 230 IPR001568 GO:0003723|GO:0033897
Tsu08g00973 274 ProSitePatterns Ribonuclease T2 family histidine active site 1. 79 86 IPR018188 GO:0003723|GO:0033897
Tsu08g00973 274 PANTHER RIBONUCLEASE T2 38 260 IPR001568 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00973 Tsu-Chr8 10712158 10717736 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00973 K01166 - gmx:100789614 435.647