Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00972 ATGAAGGCACCTCTGCAACTCTTCTTTGTAATTACCTTTCTCGGTTCGGTCCTCCGTGCAAGGACAGAAACAGACTCTTGTACCAGCAATCTGAACCTCAAAGCTCCAACCCCTTTTGATACAACAAACCTCCAATGTCTTTCTGTATGGGATGCTCAAGGTTTCATCCTCAGGTATGTTCAAACTTCTACAAACATTTGGAGCTTCATTCTCTCAACTCCAGACACAAATTCTTACATAGCTATCGGGTTTTCAGCCAGCGGCAGTATGGTAGGTTCAAGTGCAATTGTCGGGTGGGTGGCATCTAGAGGAGCTAGTGGAGGTATAAAGCAATATTATCTTGGTGGGGTTACCCCAAATCAGGTAGTTCCTGATAAAGGAAACTTGCAGGTTATCGGCAATTCATCATTCATCAGTTTGCAATCTTCTCGTTTATATCTGGTGTTTCAGTTAGAAACTACTGAACCTTTATCGTGGTTGATACTTGCCACCGGATCCACTGGTTTATTCCCTGCAGCACCAAATTATTCACTAACAAAACACTTAGACAAATTTTCCACAAGAATAGACTACTCAAAAGTAAACAATGGAAGTTCACAAGTGATTAATGGAAGTTCTTCTTCACAAGGTGATTCATGTGACTCCAAGTTAAACCTCAGTATTCCTCTCAACTTTGACACAACCAAGCTCAATTGCCTTTCTATTTGGAATGCTCAAGGATACATTCTCAGATATTCTCAAACATCTTCAAACATATGGAGCTTCATTCTCTCAGCTCCAAACCAAAATTCTTATATATCAATAGGATTCTCTCCTAATGGAGGCATGGTAGGTTCAAGTGCAATTGTAGGGTGGATCTCATCCAATGGAGTTACTGGAGGCATGAAACAATATTATCTAGCAGGGTATGCACCAAACCAAGTGGTTCCAGATAGAGGCAACTTACCAATTATTAACAATTCAACTATGATCACATCACAATCGTCGCGTTTATACATGGTTTTCCAGCTACAAACTAATCAACCTTTGTCGCGGTTGATCTATGCCGTCGGACCTAATGGAGTCTTCCCTACAGTTCCAAGTTTTGTTCTAATGCAGCACCAAGACAAAGTTTCAGTAACTGTTAATTATGCCACAGGTTCAAGTGTATTAGGAAACTCATATATGAACCTAAAGAAAACCCATGGAGTGTTAAATATATTGGGATGGGGTATATTTATCATAATGGGAGCAATAGTTGCTCGTTACTTCAAGGATTGGGATTCATTTTGGTTTAATTTCCATGCTTCAGTTCAATCATTGGGCTTTATACTCGGATTAATAGGTGTAATTAGTGGGCTTATCCTCAATAATCAACTCCATGTTGATTTTAATCTTCACAAGGCCCTTGGAGTCATCATTCTTGTTCTTGCTTGCCTCCAGGTAATGGCTTTTGTTGCTCGACCAAAAAAGGAATCAAAAGTGAGAAAGCATTGGAATTTATATCATCATAACATAGGGAGAATAGTAATTATATTAGCCATAGCCAACATTTTCTATGGAATCCATTTAGGCAAAGAAGGAAGTGCATGGAATGTAGCTTATGGTATTGTGCTTGCAATATTAGTCTCTATTGCACTTATTTTTGAGATTGGACTATGGAGTAAACActaa 1653 0.3902 MKAPLQLFFVITFLGSVLRARTETDSCTSNLNLKAPTPFDTTNLQCLSVWDAQGFILRYVQTSTNIWSFILSTPDTNSYIAIGFSASGSMVGSSAIVGWVASRGASGGIKQYYLGGVTPNQVVPDKGNLQVIGNSSFISLQSSRLYLVFQLETTEPLSWLILATGSTGLFPAAPNYSLTKHLDKFSTRIDYSKVNNGSSQVINGSSSSQGDSCDSKLNLSIPLNFDTTKLNCLSIWNAQGYILRYSQTSSNIWSFILSAPNQNSYISIGFSPNGGMVGSSAIVGWISSNGVTGGMKQYYLAGYAPNQVVPDRGNLPIINNSTMITSQSSRLYMVFQLQTNQPLSRLIYAVGPNGVFPTVPSFVLMQHQDKVSVTVNYATGSSVLGNSYMNLKKTHGVLNILGWGIFIIMGAIVARYFKDWDSFWFNFHASVQSLGFILGLIGVISGLILNNQLHVDFNLHKALGVIILVLACLQVMAFVARPKKESKVRKHWNLYHHNIGRIVIILAIANIFYGIHLGKEGSAWNVAYGIVLAILVSIALIFEIGLWSKH 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00972 550 ProSiteProfiles DOMON domain profile. 239 351 IPR005018 -
Tsu08g00972 550 ProSiteProfiles DOMON domain profile. 53 165 IPR005018 -
Tsu08g00972 550 Pfam Eukaryotic cytochrome b561 395 515 IPR006593 -
Tsu08g00972 550 Gene3D - 369 547 - -
Tsu08g00972 550 Pfam DOMON domain 242 308 - -
Tsu08g00972 550 SMART 561_7 394 515 IPR006593 -
Tsu08g00972 550 SMART DOMON_3 265 351 IPR005018 -
Tsu08g00972 550 SMART DOMON_3 79 165 IPR005018 -
Tsu08g00972 550 CDD DOMON_DOH 231 372 IPR045266 -
Tsu08g00972 550 PANTHER BNAC01G39800D PROTEIN 206 549 - -
Tsu08g00972 550 PANTHER BNAC01G39800D PROTEIN 8 198 - -
Tsu08g00972 550 ProSiteProfiles Cytochrome b561 domain profile. 359 550 IPR006593 -
Tsu08g00972 550 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 206 549 - -
Tsu08g00972 550 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 8 198 - -
Tsu08g00972 550 CDD DOMON_DOH 53 146 IPR045266 -
Tsu08g00972 550 CDD Cyt_b561_FRRS1_like 372 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00972 Tsu-Chr8 10706129 10711318 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00972 - - lang:109356980 851.662