Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00970 ATGAAGATGGCATACCTTTGCTTATTAATCTTTCTCATTCTATGTAATAATTCATCAATTCTTGTGAGTTCTCAAGATTCATGTGCCTCTAATTTGGTGGAACTTCAGCAACCAATCCCTTTTGATACAAAATCACTTCTTTGCAGTCCTGTTTGGTCTGATCACAATTTCATCCTCAGATATGCTAAGGCTTCATCAGACGTATGGAGCTTTATATTCTCATTCCCAACAAACATAAAAGCATATGCAGCTATAGGGTTCTCAAAAGATGGTAACATGGTTGGTTCTACAGCAATTGTAGGGTGGATGCCCTCTCCAGGGGCAGGAGGAATGAAAATGTACTCTCTTGATGGAAAATCTACAAAAGAAGTGATTCCTGATAAAGGAGAACTTTATATGATGAATGCTTCCATTGTTCCAGCTAGCACTTCATTAGGATACATGATTTTCCAATTGAAAGCTACACAACTTACTACAAAATTGTTATTTGCGATTGGACCAAATGGTGTATTTCCTGATTATCCAGATAATTATGCCTTGTCCAAACATAGTAGTCAAATATCATTGGTCATAGATTATTCAAAAGGTACAATTAAGGAAATTTCTAATCTAAAACTTAGAAGAAGCCATGGAATTATAAACATTGCAGCATGGAGCATTCTAATGATAATAGGATCCATAATTGCACGTTATTTCAAGCAATGGGATCCTATTTGGTTTTATTTGCATGCTTCTATTCAAATATTTGGATTTCTAGCTGGAATAGTTGGAATATTTTGTGGACTTGTTTTGTCTAAGAAACTTGATTCAAATGTCACTCATCACAAGAATATAGCAATTCTCATTATCGTTCTTGGATGCCTCCAGGTATTGGCCATTAAATTACGACCAGGAAAAGATTCAAGGATACGTAAGTATTGGAATTGGTATCATCATAACATTGGAAGAATATTGATTTGCTTTGCAGTGGCTAACACATTTTATGGACTCCATTTAGGAGGTGAAGGATCTAAGTGGTTTCTTGCTTATGGAGTTTCAATTGCAATCTTAGTTATTTTTGCTTTCATTTTGGAGTTAAGAAAATGGATTATTATTAGAAAAGAGACTAACTCCACAAAGATTCCATCTTTTCCTCAATCCAATGTGGAGTTAGCttactaa 1161 0.3471 MKMAYLCLLIFLILCNNSSILVSSQDSCASNLVELQQPIPFDTKSLLCSPVWSDHNFILRYAKASSDVWSFIFSFPTNIKAYAAIGFSKDGNMVGSTAIVGWMPSPGAGGMKMYSLDGKSTKEVIPDKGELYMMNASIVPASTSLGYMIFQLKATQLTTKLLFAIGPNGVFPDYPDNYALSKHSSQISLVIDYSKGTIKEISNLKLRRSHGIINIAAWSILMIIGSIIARYFKQWDPIWFYLHASIQIFGFLAGIVGIFCGLVLSKKLDSNVTHHKNIAILIIVLGCLQVLAIKLRPGKDSRIRKYWNWYHHNIGRILICFAVANTFYGLHLGGEGSKWFLAYGVSIAILVIFAFILELRKWIIIRKETNSTKIPSFPQSNVELAY 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00970 386 CDD DOMON_DOH 54 188 IPR045266 -
Tsu08g00970 386 SMART DOMON_3 82 166 IPR005018 -
Tsu08g00970 386 ProSiteProfiles DOMON domain profile. 55 166 IPR005018 -
Tsu08g00970 386 ProSiteProfiles Cytochrome b561 domain profile. 174 366 IPR006593 -
Tsu08g00970 386 CDD Cyt_b561_FRRS1_like 181 359 - -
Tsu08g00970 386 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 9 363 - -
Tsu08g00970 386 SMART 561_7 209 330 IPR006593 -
Tsu08g00970 386 PANTHER BNAC01G39800D PROTEIN 9 363 - -
Tsu08g00970 386 Gene3D - 185 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00970 Tsu-Chr8 10685723 10688841 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00970 - - aprc:113851090 570.081