Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00967 atgtTGCAAATTACATGCAATTTACATGCAAAATCAAAAGCAACACCATATACTAACAAAATCACAATCACATTGACTCTATCATCACAAAATCgttcacatttttcaaaccacACAGTGAAACTCACGCCACCGTCACAACAACCACAAACCACCACACTTCACCGAACAATGCCGACGGGCGAACTCCGATCACCAccaaaatcaacaaacaattccACCGCTATCATCGGATTCGAAGACGAAGTTTGGTTATGGTCACAAATCAAAGCTGAAGCACGTCGTGATGCTGAATCGGAACCAGCGTTAGCGAGTTATCTTTACTCAACGATTCTCTCTCATTCTTCACTTGAACGATCACTTTCGTTTCATCTTGGTAACAAGCTTTGTTCATCAACGCTTCTTTCAACTCTTCTCTATGATCTTTTTCTCAACGCTTTTGCTACTGATCCTTCTTTGAGTTCTGCTGCTGTTGCTGATCTTCGTGCTGCTCGTGAACGTGATCCTGCTTGTATCTCTTACTCTCACTGTCTTCTCAATTACAAAGGGTTCCTCGCTTGCCAGGCGCACCGTGTGTCACACCTGTTGTGGAGGCAGGCTAGGCGGCCCTTAGCTTTGGCACTACATTCTCGCGTTGCTGATGTATTTGCGGTGGATATTCACCCGGCAGCGAGGATTGGGAAAGGGGTTCTGTTTGACCATGCCACAGGAGTGGTGGTAGGTGAGACGGCTGTGATTGGAAATAATGTGTCGATCCTGCACCATGTCACATTGGGTGGAACTGGAAAGGTTGGTGGGGATCGCCATCCCAAGATTGGGGATGGGGTGCTCATTGGTGCTGGTGCTACCATTCTGGGCAATGTTAAGATTGGGGAAGGTGCTAAGATAGGTGCTGGTTCTGTTGTTTTGATTGATGTGCCGCCGAGGACCACTGCTGTTGGGAACCCAGCGAGACTGGTTGGTGGTAAGGAGAAGCCATCTAAGCATGAGGATGTGCCTGGGGAGTCGATGGACCATACTTCTTTTATATCTGAGTGGTCTGATTatattatttga 1056 0.4517 MLQITCNLHAKSKATPYTNKITITLTLSSQNRSHFSNHTVKLTPPSQQPQTTTLHRTMPTGELRSPPKSTNNSTAIIGFEDEVWLWSQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNAFATDPSLSSAAVADLRAARERDPACISYSHCLLNYKGFLACQAHRVSHLLWRQARRPLALALHSRVADVFAVDIHPAARIGKGVLFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFISEWSDYII 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00967 351 Pfam Hexapeptide repeat of succinyl-transferase 236 252 IPR001451 -
Tsu08g00967 351 PANTHER SERINE ACETYLTRANSFERASE 46 351 - -
Tsu08g00967 351 MobiDBLite consensus disorder prediction 322 336 - -
Tsu08g00967 351 Gene3D Hexapeptide repeat proteins 219 340 - -
Tsu08g00967 351 MobiDBLite consensus disorder prediction 316 338 - -
Tsu08g00967 351 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 278 306 IPR018357 GO:0016740
Tsu08g00967 351 SUPERFAMILY Trimeric LpxA-like enzymes 81 321 IPR011004 -
Tsu08g00967 351 SMART SATase_N_2_a 85 189 IPR010493 GO:0005737|GO:0006535|GO:0009001
Tsu08g00967 351 Pfam Bacterial transferase hexapeptide (six repeats) 269 302 IPR001451 -
Tsu08g00967 351 Pfam Serine acetyltransferase, N-terminal 85 189 IPR010493 GO:0005737|GO:0006535|GO:0009001
Tsu08g00967 351 MobiDBLite consensus disorder prediction 37 72 - -
Tsu08g00967 351 Gene3D serine acetyltransferase, domain 1 68 218 IPR042122 -
Tsu08g00967 351 TIGRFAM cysE: serine O-acetyltransferase 159 318 IPR005881 GO:0005737|GO:0006535|GO:0009001
Tsu08g00967 351 CDD LbH_SAT 216 316 IPR045304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00967 Tsu-Chr8 10647242 10649425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00967 85 341 Miscellaneous Gene Families AT2G17640 54.475 5.21e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00967 K00640 - gmx:547632 522.316